Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2249 ATGGGTGAAGGGTTGAGGCTACTGAAAATCACAGTTGTGCGAGGGAAAACATTAGTGATCCGGGATTTCAAGAGCAGTGATCCTTATGTTGTGGTCAAGCTTGGCAATCAGACAGCAAAGACCAGGGTCATCAATAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTAAATTTCACTCTCACTGAACCATTGGGATTTCTCAATTTGGAGGTATTTGATAAAGATGTTTGGAAGGCTGATGACAAGATGGGAAAATCATACCTGAACCTTCAGCCATTGGTGTCTGCAGCTAGATTGAGGGACATTTTGGGGAGTTCATGTGGTGAAACAGCACTGAGGAAGGTGATGCCAGAGAGAGATAACTGTCTTGTCCGTGAAAGCATCATCAAAAATAATGTGAATGGAGAGGTGGTGCAGAATGTTTGGTTAAGGCTTGATGGAGTTGAGTCCGGGGAGCTTGAATTGACCATCAAGTTGATCACTCCTGTTGCCTCTTCGTAG 501 0.4431 MGEGLRLLKITVVRGKTLVIRDFKSSDPYVVVKLGNQTAKTRVINSCLNPVWNEELNFTLTEPLGFLNLEVFDKDVWKADDKMGKSYLNLQPLVSAARLRDILGSSCGETALRKVMPERDNCLVRESIIKNNVNGEVVQNVWLRLDGVESGELELTIKLITPVASS* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2249 166 Pfam C2 domain 8 98 IPR000008 -
Ahy11g2249 166 CDD C2_ArfGAP 7 151 - -
Ahy11g2249 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 163 - -
Ahy11g2249 166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 160 IPR035892 -
Ahy11g2249 166 PRINTS C2 domain signature 46 59 IPR000008 -
Ahy11g2249 166 PRINTS C2 domain signature 22 34 IPR000008 -
Ahy11g2249 166 PRINTS C2 domain signature 67 75 IPR000008 -
Ahy11g2249 166 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Ahy11g2249 166 Gene3D C2 domain 5 164 IPR035892 -
Ahy11g2249 166 SMART C2_3c 7 102 IPR000008 -
Ahy11g2249 166 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2249 Ahy-Chr11 135726928 135728010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2249 1 158 C2H2 Transcription Factor Family AT4G21160 43.750 3.43e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2249 - - aip:107636908 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2249 11 135726928 135728010 Ahy1g2602 1 104817562 104818564 hybridization