Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2229 ATGGATTGTGTTGCCACTGCAATGGATCTTGTCAATGGAGGTAACAGTCTAGCTTCCAAGCAGCGGTTACGCTGGACCAATGACCTCCACGAACGCTTCGTCGATGCGGTTGCTCAACTTGGTGCCACACCTAAAGGTGTCCTCAGAGTTATGGGTGTGCAAGGGTTGACAATTTACCATGTCAAAAGTCATTTACAGAAATACCGACTAGCAAAATATCTACCTGGCTCCTCAACTGATGGGAAAAACGCCGAGAAGAAAGAAACAGAGGATGTACTTTCTAATCTTGATGGTTCATCTGGGATGCAAATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAGCGACTGCATGAGCAATTAGAGGTGCAGAGACAACTACAACTAAGGATAGAAGCGCAGGGTAAATACTTGAAGAAGATTATTGAAGAGCAGCAGCGGCTCGGCGGTGTTCTTACAGAAGCACCTGACTGGGGCGCTACAGCTCTGGTTCCAGGAGTTACACACCAAGAAGATAATAAGACCGATCAAGCAACCCCTGCCACAACCTCTGAGAGCCCCCTTCTGGAGGTAGCTGTGAAAGAACAAGCCCTGGCTAAGAGTCTTTCAATTGATGAATCCTTTTCATCTCAGCATGAACCGTTGACACCTGATTCTGGTTGCCATGTTGGCAACCCCACTGGCGGCCCTGAAGAGGAGAGATCAACAAAGAAACAGCGCTTGAACATAGATGGATCATATTCTAGACCAGAAATGCTGCTTCCGCATCAAATACTGGAGTCAAATGTCTCATCAAACAAGCAACCAAATGTTGTTTCTACTCCCCAGGAGGAATATGATCATTCAATGGATATAGCTGCCAAAAGTGTGACAAGGAATTCCAGCAGGGTTGTATGA 900 0.4622 MDCVATAMDLVNGGNSLASKQRLRWTNDLHERFVDAVAQLGATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPGSSTDGKNAEKKETEDVLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLGGVLTEAPDWGATALVPGVTHQEDNKTDQATPATTSESPLLEVAVKEQALAKSLSIDESFSSQHEPLTPDSGCHVGNPTGGPEEERSTKKQRLNIDGSYSRPEMLLPHQILESNVSSNKQPNVVSTPQEEYDHSMDIAAKSVTRNSSRVV* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2229 299 MobiDBLite consensus disorder prediction 260 278 - -
Ahy11g2229 299 MobiDBLite consensus disorder prediction 207 241 - -
Ahy11g2229 299 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 2 291 - -
Ahy11g2229 299 MobiDBLite consensus disorder prediction 169 189 - -
Ahy11g2229 299 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 71 IPR006447 GO:0003677
Ahy11g2229 299 Pfam MYB-CC type transfactor, LHEQLE motif 102 148 IPR025756 -
Ahy11g2229 299 MobiDBLite consensus disorder prediction 260 299 - -
Ahy11g2229 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Ahy11g2229 299 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 2 291 IPR044848 GO:0003700
Ahy11g2229 299 SUPERFAMILY Homeodomain-like 19 70 IPR009057 -
Ahy11g2229 299 MobiDBLite consensus disorder prediction 169 187 - -
Ahy11g2229 299 Gene3D - 19 74 - -
Ahy11g2229 299 Coils Coil 105 125 - -
Ahy11g2229 299 Pfam Myb-like DNA-binding domain 23 69 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2229 Ahy-Chr11 135309249 135312416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2229 51 267 G2-like Transcription Factor Family AT2G01060 64.977 1.38e-86 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy11g2229 Myb_CC_LHEQLE 3.90E-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2229 - - aip:107637104 572.778