Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2206 ATGACCAGGTTTCACATGCTAACTTCATCAAGAGTAATAATTTCTGCTTTTCGGAGAATCCCTAGAGCTTCTTGGAATGCAAAAGAAAGGTTATGGATGTTCCCGCTGTCTTCCTTGTCAGAAGCAGAGAAGTTGGAGGTGGTAAAAGACAAAATTAAGTCTCCCAAATCAAAAGATGAGTCTGAATCTCTTAAATTTACTCAAAAGAATCTGATTAACAAGATATATACTAATTCTGCAGATGCCAAGATTCCTGCTGTTCTTGAATATCTCGGAACTGTCATTGAGGTATTGCTCCCCTCCGCTGCTTCAAAGCAAGAAAATGTCAACAAAGAATTAGTGACTGCACCTGCAGGTTGCAAGTTTTTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATGAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCCGGATTGATGGAGGTACACCCGGTGCATGAAGGCAACAATTGGTAGATTTTTAGGAAAAGGATTATATCAAAGCGGCTGTGCTATCCGTTAAAGCTGGGGGAGTTGGATTAACTTTAACTGCTGCAAGCTTTGCAGAACAATCCTGGACTCCAGGTGACCTGATTCAGGCCAAAGATCGTGCTCATAGAATTGGCCTGGTCTCATCAGTAAATATATACTAATTGTTGGCAAATGATACGGTTCACGACATCATATGGGATGTGGTGCAATTCAAACTGGATAATTTGGGGCAGTTATTGAAAAATCAGATGTTTAGATGGCCATGA 768 0.4062 MTRFHMLTSSRVIISAFRRIPRASWNAKERLWMFPLSSLSEAEKLEVVKDKIKSPKSKDESESLKFTQKNLINKIYTNSADAKIPAVLEYLGTVIEVLLPSAASKQENVNKELVTAPAGCKFFIFAHHQPMIDAIHECLLKKKVGCIRIDGGTPGA*RQQLVDF*EKDYIKAAVLSVKAGGVGLTLTAASFAEQSWTPGDLIQAKDRAHRIGLVSSVNIY*LLANDTVHDIIWDVVQFKLDNLGQLLKNQMFRWP* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2206 252 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 44 247 - -
Ahy11g2206 252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 245 IPR027417 -
Ahy11g2206 252 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 44 247 IPR030101 GO:0006281|GO:0031297|GO:0036310
Ahy11g2206 252 CDD SF2_C_SNF 81 220 - -
Ahy11g2206 252 Gene3D - 33 251 IPR027417 -
Ahy11g2206 252 SMART helicmild6 133 210 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2206 Ahy-Chr11 134895822 134901482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2206 113 229 RAD5 or RAD16-like Gene Family AT1G05120 31.452 1.90e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2206 K14440 - ahf:112722755 482.641