Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2204 ATGGAACTTTCGAGTCAAGAAGGAGATATACCAATCGCAGTAAACACCACCGCCAATTATGGTGGCAATGGCCATGGCGCCCACATCAACATTCACCACACCCAAAACCCTTCCAATGGCTCCTCTATGCACCCGCTCGACAATGGACCCTACAATAGCAAGCAGGAGGAGGAAGAGGAGGAGGAGGTGGTGGTGCCGCTCGTCAGGTACAGAGAGTGCCTCAAGAACCATGCCGCCGCCATGGGAGGAAATGCCACCGACGGTTGTGGCGAGTTCATGCCAAGCGGAGACCACGGCACCATGGAAGCCCTCACCTGCTCCGCCTGCCGCTGCCACAGAAACTTCCACCGAAAGGAAATCCAAGGCGAGCCTTCAGCCCCACCCCCGCCCTTGCTGGAGTACCACCACCACCACTTCAACACCGCCACCAGGCACCTCGCCGCTTCTAGAAAGTTCCTTCACAAGAACATGCACCATCATCATCATCTCGGTTACCCTACTGCTGGCGGCGGTAACATCCTTCCGTCGAGAACGGTGCCCCCGGCGCAGATGATAATGCCCTACAACATAGGCCCCATGCCGTCGTCGGAGCACTCGGACGAGCAGGACGAGCGGGTGAAGAAGAAGCGGTTCAGGACAAAGTTCAGCCAGGAGCAGAAGGAGAAGATGCTGGCTTTTGCGGAGAAGGTTGGTTGGAAGATTCAGAAGCAAGAAGACTCGGTTGTTCAGAACTTCTGCAACGAGATTGGAGTCAAACGCAGAGTCCTCAAGGTTTGGATGCATAACAATAAACACAACCTCGCTAAAAAAAACCTTCTCATCATTCCCCCATCCTCTTCTACTTAA 846 0.5461 MELSSQEGDIPIAVNTTANYGGNGHGAHINIHHTQNPSNGSSMHPLDNGPYNSKQEEEEEEEVVVPLVRYRECLKNHAAAMGGNATDGCGEFMPSGDHGTMEALTCSACRCHRNFHRKEIQGEPSAPPPPLLEYHHHHFNTATRHLAASRKFLHKNMHHHHHLGYPTAGGGNILPSRTVPPAQMIMPYNIGPMPSSEHSDEQDERVKKKRFRTKFSQEQKEKMLAFAEKVGWKIQKQEDSVVQNFCNEIGVKRRVLKVWMHNNKHNLAKKNLLIIPPSSST* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2204 281 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 70 119 IPR006456 -
Ahy11g2204 281 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 69 120 IPR006456 -
Ahy11g2204 281 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 208 264 IPR006455 -
Ahy11g2204 281 Pfam ZF-HD protein dimerisation region 68 120 IPR006456 -
Ahy11g2204 281 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 6 270 - -
Ahy11g2204 281 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 6 270 - -
Ahy11g2204 281 Gene3D - 194 270 - -
Ahy11g2204 281 SUPERFAMILY Homeodomain-like 196 269 IPR009057 -
Ahy11g2204 281 MobiDBLite consensus disorder prediction 24 60 - -
Ahy11g2204 281 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2204 Ahy-Chr11 134867277 134868880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2204 1 271 ZF-HD Transcription Factor Family AT1G14440 44.805 8.31e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Ahy11g2204 ZF-HD_dimer 6.10E-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2204 - - adu:107465625 328.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2204 11 134867277 134868880 Ahy1g2636 1 105263501 105265108 hybridization