Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2176 ATGGCGACATCACAAGACGAACGTGTTTCAAGCGAGGGTCTTTTTTCATGCACACCACCGAGCCAAAATTCATTAATGGAGTGCGATATGGTTGAACCGCTAGTTTGTGTTTCGTCTGAGGTTGCAGAGAATTTATCAAACCAATATGAAAACTTATTCGGCGATGTCGTCATCCACGGTCAGAAGTCGAACAAGGAAGCCATGCAACTGTCGGATGTTATTGAGGTTGGAAGTGAAGAAATGGAGCTTGGTGACGAGTTACCAGATCATGGTTGCCTTCAAGAAGACGAGATACCAAGAGTTGGAATGCGGTTTGCGCAGTTACAGATGGCTAATGACTTTTATGTTTCCTACGCAAAGAAAGTAGGATTTGCAACTAAGATAAGGACGACAACATATGACAAGATCACAAAGATACTCGTTAACCAAGCTATCCACTGTAATCGCGACGGGTTCTGTGGGTCTCGTGTCAAATCACCAATACGGAAGAATACGATTTCAGCTGCTGGGTGCAAGGCAAGGATATATGTCAAGTTTGACAAAGACATGCAAGACTGGGTTTTGTTCAAGGTTGAGTTGAGGCACTCCCACCCTTGTTCAGCGAGAAAGGCTGTTCACTACCATGAGTATAGGCAGCTGACCATGCATTCGAAGTGTGTGATCGAGGATAATGATGAGGCTAGGATTCGACCAAATAAGACATTCCTAGCTTTGGCAAATGAGGCAGGAGTCCCATCTAACCTTGGATTCTTAGAAAAGGATTTAAGAAACTATATAACAGTAAGACTTCGAACTAGCAACATGAATACGGATGTTAGGGAGATGATGAGCTACTTCATGAGAATGAAGGACATCAATCCGAACTTCTTTTACGCGGTGAAGTTGGACGAGGAGCGTAAATTTAGGAGTGCAGTATGGATGGATGCAAGGTGTAGGGCGTCGTATGAATACTACGGAGACGTCGTGTCAGTTGATAACACCTACAGTACAAACAAGTATGTAGTAGTTAAGTTGGTGTTTTGTCCTTTATTCGGTAAAACTCTATGCGATCGTGTTTGTCATTACTCATGTCCGGTTGGTTTTTCTAGTAGGCATGGATTACCATTTGTGTCGTTCATTGGGGTCAACCACCATGGTAAGTCGACCCTTCTCGGTTGTGCTTTGCTGGGGAATGAGAAAATCCCAAGTTATGAGTGGGTTTTCAGCCAATGGGTGAAGTGCATGGGAACTGCTCCACAGCGTATCATAACCAATCAATGTCAATCCATTTTTCATGCGATAAAAAATACATTACCCGACACACGCCACCGGTGGTGCATTTGGCATATTACAAAGAAGTTACCACAGAAGCTTGGGGGTTACCACCGGTACAGAGATTTGTATGATGACCTCAATGACATTGTGTGGAACTCTCGGACTGAGGAGTCATTTGAAGATAACTGGTCTGATTTTATAGATGAGTACAACTTACATAACAACACATGGCTGTCAGATCTGTATGATGACCGACGCATGTGGGTCCCCATATACTTCAAGGGTGAATTTTGGACTACCATGAGGAGTACGCAAAGAACTGAGAGCATGCACGCATTCTACGGTGGATTCTTACACAGTAAGACTAGCTTGGTTCAATTTGTTCACGAATATGACAATGTGCTTAGAGTCAAGGAGCAGAGGGAATTGGAGGATGATGCTGTAGACTTGAGGGGTGTTATCCCTTGTGCAACGAGCTCACCTATAGAGAAACAGTTTCAGCAAGACTACACTACCAGCATGTTTAGGGATGTTCAAACTGATTTCGTAAAGAAGGCTAATTGCAGGGTCTCTGTAGTTGCTGAAGATGGCCCATCGGTGTGCATGAAGGTGGAAGAGAAGATATTAGTCAACAATACTATTCTCTGCGTTCCGTACGATGTACACTTTGACTGTTCCACACAAGAAGTTCGTTGTGATTACAATCTTTTTGAGAGTTCAGTATCTCCCCCCCCCCGTTATGTTCTCCCTCGATGGAGCAAGAAAATAAAGCGCAAGCATACGTATGTCAAGATTATCCATGATGTTAGCCGGTTGGATGAGAGTCATGTTGCATTCAGGGAACTATGTGCATACTTCTATAATATTTCTCAAGAGTTCGTTAGTGATGATGACGAAACAGCATTGCTGCATGCTGCTCTAGAAGAAACAAGGGCCAAGTTGGCTGCGCACAGTGCCAAGAAGAGGTCCGAGAGTGTGTCAGAGACCCATAACAGCAATGGCTCACAGAGTTCGAACGTTGTCGGTGTGGTCGACATCCAAGGCCCGTCGAAGGTCACCACAAAGGGCCGGCCAAAGAGTAAGAGGCTCGGCGCTGCCCTGGAGAAGTCCTTCAAGAATTCTGCTAGGAGGGAAAACAAGAATTCATCCCTGGTGGTTCGTCCGGACGCATCTCAAGATGTAAACCTTGGTGCTGTTGTTGGCAGGAATGTGCCCGAACAAGCCAGTGGCTTCATGTCTTTGTTAAGCTCCTTCAACAAAAGTTAG 2520 0.4476 MATSQDERVSSEGLFSCTPPSQNSLMECDMVEPLVCVSSEVAENLSNQYENLFGDVVIHGQKSNKEAMQLSDVIEVGSEEMELGDELPDHGCLQEDEIPRVGMRFAQLQMANDFYVSYAKKVGFATKIRTTTYDKITKILVNQAIHCNRDGFCGSRVKSPIRKNTISAAGCKARIYVKFDKDMQDWVLFKVELRHSHPCSARKAVHYHEYRQLTMHSKCVIEDNDEARIRPNKTFLALANEAGVPSNLGFLEKDLRNYITVRLRTSNMNTDVREMMSYFMRMKDINPNFFYAVKLDEERKFRSAVWMDARCRASYEYYGDVVSVDNTYSTNKYVVVKLVFCPLFGKTLCDRVCHYSCPVGFSSRHGLPFVSFIGVNHHGKSTLLGCALLGNEKIPSYEWVFSQWVKCMGTAPQRIITNQCQSIFHAIKNTLPDTRHRWCIWHITKKLPQKLGGYHRYRDLYDDLNDIVWNSRTEESFEDNWSDFIDEYNLHNNTWLSDLYDDRRMWVPIYFKGEFWTTMRSTQRTESMHAFYGGFLHSKTSLVQFVHEYDNVLRVKEQRELEDDAVDLRGVIPCATSSPIEKQFQQDYTTSMFRDVQTDFVKKANCRVSVVAEDGPSVCMKVEEKILVNNTILCVPYDVHFDCSTQEVRCDYNLFESSVSPPPRYVLPRWSKKIKRKHTYVKIIHDVSRLDESHVAFRELCAYFYNISQEFVSDDDETALLHAALEETRAKLAAHSAKKRSESVSETHNSNGSQSSNVVGVVDIQGPSKVTTKGRPKSKRLGAALEKSFKNSARRENKNSSLVVRPDASQDVNLGAVVGRNVPEQASGFMSLLSSFNKS* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2176 839 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 80 338 IPR031052 GO:0006355
Ahy11g2176 839 MobiDBLite consensus disorder prediction 746 762 - -
Ahy11g2176 839 Pfam MULE transposase domain 364 446 IPR018289 -
Ahy11g2176 839 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 365 741 IPR031052 GO:0006355
Ahy11g2176 839 Pfam FAR1 DNA-binding domain 113 199 IPR004330 -
Ahy11g2176 839 PANTHER OS03G0843700 PROTEIN 365 741 - -
Ahy11g2176 839 MobiDBLite consensus disorder prediction 779 794 - -
Ahy11g2176 839 MobiDBLite consensus disorder prediction 734 806 - -
Ahy11g2176 839 PANTHER OS03G0843700 PROTEIN 80 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2176 Ahy-Chr11 134387059 134399956 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g2176 FAR1 9.90E-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2176 - - ahf:112778726 1341.64