Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2167 ATGTTGGAGAGAAAAATGTTACCCACCACCCGGAAATTTGGTTTTGATGTTAAGAATGAAATGAGTAAGCACATAGCATCACAAGAAGCAAAAATATTGGAGGATCAACTACCATCATTTGAAGCTTCTTGTAATAAGAAAGCTAGAGTGTCCATAAGAGCAAGATCAAATTTTTCTATGATGGTTGATGGGTGCCAATGGAGAAAATATGGACAAAAAACATCAAAGGGCAATCCTTGTCCTCGAGCCTACTATCGTTGTAGCATGGGACAAACATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTGCAATGGATGAGAGAGTTGTGATAACAACGTACGAGGGGAATCACAATCATCCACTCCCAGAAGCAGCAAGATCCATAGCCACCACAACAACATCAGCATTGAACATGTTCCTTTGTGGCTCCATGACCACCACCACAACTAGTAGTACATCACTTTCACTATCTTCTACTTCATCATCATGTCCTACTCTAACACTGGATTTAACTACTCAACAACCCTCCAATGATATTATTGCATCACAACAACCATTACTATTCCCTCTGCCTCTAAATGCTTCCTATACTCAAGAAAACAACCTTGCCTTGGTGGATCTTGTTACTGCAGCTTTAACCAACGATCCTTCTCTTAAGGAAGCATTACTTGCAGCTTTTTCCTCTCTCACTCACAATAATAACACCATAATCAATGAACATGTTTAG 726 0.4022 MLERKMLPTTRKFGFDVKNEMSKHIASQEAKILEDQLPSFEASCNKKARVSIRARSNFSMMVDGCQWRKYGQKTSKGNPCPRAYYRCSMGQTCPVRKQVQRCAMDERVVITTYEGNHNHPLPEAARSIATTTTSALNMFLCGSMTTTTTSSTSLSLSSTSSSCPTLTLDLTTQQPSNDIIASQQPLLFPLPLNASYTQENNLALVDLVTAALTNDPSLKEALLAAFSSLTHNNNTIINEHV* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2167 241 ProSiteProfiles WRKY domain profile. 56 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy11g2167 241 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 27 237 IPR044810 GO:0003700
Ahy11g2167 241 Pfam WRKY DNA -binding domain 63 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy11g2167 241 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 27 237 - -
Ahy11g2167 241 SUPERFAMILY WRKY DNA-binding domain 55 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy11g2167 241 Gene3D WRKY domain 45 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy11g2167 241 SMART WRKY_cls 61 121 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2167 Ahy-Chr11 134185861 134188123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2167 1 171 WRKY Transcription Factor Family AT4G04450 48.223 2.00e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy11g2167 WRKY 4.50E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2167 - - ahf:112722714 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2167 11 134185861 134188123 Ahy1g2669 1 105746684 105748505 hybridization