Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2128 ATGGAAGCCAGATTTGGGGGAAAGAATCAGTTTTTATATGGAGCTGTGGTTCCAGAAATGAAAGGTGTTGGGAAGAGGAGTTTGGAGTGGGATTTGAATGATTGGAGATGGGACGGTGATCTCTTCACTGCTCAACAACTCAATTCGGTTCCATCAGATTGTAGAAGCCGCCAATTTTTCCCACCAAATCCTGAGATTCATGCAAATAATAATGCTATTAATGCATCTAACAGTATCTCTTCTTCAATCAACCCTGGTGAAGAAGGGAAGAGAGAGTTGGAGAAGAAGAGAAGAGCTGTTGTAATAGGTGAAGGCGAAGAAAGGGAGGAGCTGAATGATGAAGGAGGAGGTGGTGGTGGTGGTGGTGGTAGTTCTCTTAATTTGAATCTTGGAGCTCAGGTTTACCCAATCATGGTGGAAGGGGATGAGAAAAGTGGGAAGAAGACAAAGGTAGTAGAGACAGCTGCTACAACTTCTAACCGTGCAGTTTGTCAGGTACAAGATTGTAGGGTTGATCTTAGTGGTGCAAAGGATTACCACCGTCGACATAAAGTTTGTGATGTGCATTCTAAAGCTACCAAGGCCCTTGTGGGAAATGTTATGCAGCGGTTTTGTCAACAGTGTAGCAGGTTTCATGCACTTGAGGAGTTTGATGAAGGGAAGCGGAGTTGTCGTAGGCGTCTGGCAGGCCACAATAGGAGGAGGAGGAAAACGCATCCTGATGCAGCTGGAGTTAATGGAGGTTCTCTGAATGGTGAAAGGGGTAGTAGCTATCTGTTGATGAGTTTGTTACGGATACTGTCCAATATGCATTCAAACGGGTCAGATAATACGAGGAACCAGGATATTCTCTCTCATCTACTGGGGAACCTGGCAAATCTGGCGGGTACACTTAATGAAAGAAGTGTAGCCTCTTTGCTGGAGGGATCTCAAGGTTTGGTAAATTCTAGGACACCTGAAGCTGCGCACAATGTGCCAAATCTTAATTCTAATGGTCCTGAAGCCTCAAGGCCTTCTGGTTCTTCCATCAAGACGGGTAACGGTGCCATCCGGCAGGATCCTCCAAGGTCTATGGTACAGTGTGAGGCAGCACCTTCGAATGCTGTCACAGAAAAATGCCTACCTTTAGGTCATGGTGCAGCGGCAAATTTGAAACCTTCGGGAATCCAGCCCTCCTCAAATATACTTCTATCGAGGGATAGCCAACCATCCCAGTTAATTGCAGCAGATACTAGTGTTGGAAGGGATCACTTAAATAACATCGACCTGAATAATGTATATGATGATACACAGGATTGTGCCGAGAATCCTAAGAAGTCTTCTGCTCCCATGGGAGAGGTTAGGTCTCTTGATCATCCTTTGTGGTTGCAATGTAACTCTCTCAAATCAAGTCCACCACAGACAAGTATAAACTCAGATTCAACCTCCACCCAGTCACCATCTAGTTCTAGTGGAGAAGCTCAGTCTCGCACAGATCGAATAGTTTTCAAACTCTTTGGCAAGGATCCAAGTGATTTTCCCCATGTTCTCCGATCACAGCTCTCCTGTAACCTCGGATCCAGCTTGAGCAAGCTTGCTTCAAATGATTCTTTCTGGACAACAGGTTGGGTATATACAAGGGTGCAACAATCTGTAGCGTTTTTGTATAACGGCCAAGTTGTCTTAGACGCTCCCTTGCATCTTAGAAGCCCACAGAATTGTAGGATTTCATGCATTAAACCACTTGCTGTTCCTAAAAATGCAAATGCTAAGTTTACTGTGAAAGGGTTCAACCTTTTCAGATCCAGCACAAGGATGCTTTGTGCTTTTGAAGGGAAGTATCTGGTACATGATAGTTCTCATGATTTGATTGATGTAGCCGATGTATCCGATGCAGCTATCCAACATCTCAGCTTCTCTTGTCAAATACCAAATGTAACTGGCAGGGGGTTTCTTGAGGTGGAAGATCATGGTCTTAGCAGCTGTTCCTTTCCATTTATAGTCGCAGAGCAAGAAATTTGTACAGAGATCTGCAAGCTGGAGAATGTGATTGAGGCGGCAGATGCCACTGATGACATATTGTTAAAGAGCAAACAAATAGAAGAAAAGACTCGAGCTCTGGAATTCTTACAAGAAATGGGTTGGCTTCTTCATAGAAGTCGTTTGAATGTTAGGCTAGGTACCCTGGCGCCTAGTCAGGATCCCTTTCATTTCAATCGGTTCGTGTGGCTTGTTGATTTCTCCATGGACCATGATTGGTGTGCAGTGGTGAAAAAACTCTTGGACATTATATTTGAGGATGGTGTTGATGTAGGAGATCATACCTCCATCGAGCTCGCGTTATTGGACATGGGTCTTCTACACAAAGCTGTGAAGAGAAATTCAAGGCCTATGGTGGAACTATTGTTAAAATTTGTACCCACGAAAAGTTCAGCTGGGGCAACCAAATTCTTATTTAGACCTGATAATGTTGGGCCGGCAGGGTTAACTCCACTTCATGTCGCAGCAAGCATGAAAGGCTCTGAGAATGTCTTGGATGCGTTAACTGATGATCCAGGAATGGTTGGAATTGAAGCATGGAAAAGTGCTAGGGACAATACAGGCTTGACGCCTAACGATTATGCAAGCCTCCGCGGCTATTTCTCCTATATTCAACTTGTCCAGAAGAACACCAACAAAAGGCGCGAAGGACAACATGTGCTTGATATCCCTGGCGCCATTGTAGACAGTAACACAAAGCAGAAGCAACTAGATGTGAACAGGACATCTAAGCTTGCAAGTTTGCACACCGAGAAGATCGAAACCACAGTGATGGCGAGTCAATGCGGGCTATGCCAGCACAGGCTGGCTTATGGCGGCACGAGAGCGGCACTGGTTTATCGGCCGGCAATGCTCTCACTTGTGGCCATTGCAGCTGTTTGTGTATGTGTGGCATTGCTCTTCAAAAGCTCACCTAAAGTTTACTATGTCTTCCAGCCTTTCAACTGGGAATCACTAGGATATGGTTATATCTAA 2994 0.4496 MEARFGGKNQFLYGAVVPEMKGVGKRSLEWDLNDWRWDGDLFTAQQLNSVPSDCRSRQFFPPNPEIHANNNAINASNSISSSINPGEEGKRELEKKRRAVVIGEGEEREELNDEGGGGGGGGGSSLNLNLGAQVYPIMVEGDEKSGKKTKVVETAATTSNRAVCQVQDCRVDLSGAKDYHRRHKVCDVHSKATKALVGNVMQRFCQQCSRFHALEEFDEGKRSCRRRLAGHNRRRRKTHPDAAGVNGGSLNGERGSSYLLMSLLRILSNMHSNGSDNTRNQDILSHLLGNLANLAGTLNERSVASLLEGSQGLVNSRTPEAAHNVPNLNSNGPEASRPSGSSIKTGNGAIRQDPPRSMVQCEAAPSNAVTEKCLPLGHGAAANLKPSGIQPSSNILLSRDSQPSQLIAADTSVGRDHLNNIDLNNVYDDTQDCAENPKKSSAPMGEVRSLDHPLWLQCNSLKSSPPQTSINSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKDPSDFPHVLRSQLSCNLGSSLSKLASNDSFWTTGWVYTRVQQSVAFLYNGQVVLDAPLHLRSPQNCRISCIKPLAVPKNANAKFTVKGFNLFRSSTRMLCAFEGKYLVHDSSHDLIDVADVSDAAIQHLSFSCQIPNVTGRGFLEVEDHGLSSCSFPFIVAEQEICTEICKLENVIEAADATDDILLKSKQIEEKTRALEFLQEMGWLLHRSRLNVRLGTLAPSQDPFHFNRFVWLVDFSMDHDWCAVVKKLLDIIFEDGVDVGDHTSIELALLDMGLLHKAVKRNSRPMVELLLKFVPTKSSAGATKFLFRPDNVGPAGLTPLHVAASMKGSENVLDALTDDPGMVGIEAWKSARDNTGLTPNDYASLRGYFSYIQLVQKNTNKRREGQHVLDIPGAIVDSNTKQKQLDVNRTSKLASLHTEKIETTVMASQCGLCQHRLAYGGTRAALVYRPAMLSLVAIAAVCVCVALLFKSSPKVYYVFQPFNWESLGYGYI* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2128 997 Gene3D - 155 225 IPR036893 GO:0003677|GO:0005634
Ahy11g2128 997 MobiDBLite consensus disorder prediction 317 348 - -
Ahy11g2128 997 MobiDBLite consensus disorder prediction 77 96 - -
Ahy11g2128 997 MobiDBLite consensus disorder prediction 104 123 - -
Ahy11g2128 997 ProSiteProfiles Zinc finger SBP-type profile. 161 238 IPR004333 GO:0003677
Ahy11g2128 997 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 13 514 - -
Ahy11g2128 997 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 513 996 - -
Ahy11g2128 997 MobiDBLite consensus disorder prediction 228 250 - -
Ahy11g2128 997 MobiDBLite consensus disorder prediction 462 489 - -
Ahy11g2128 997 SUPERFAMILY Ankyrin repeat 777 881 IPR036770 -
Ahy11g2128 997 SUPERFAMILY SBT domain 162 242 IPR036893 GO:0003677|GO:0005634
Ahy11g2128 997 MobiDBLite consensus disorder prediction 317 354 - -
Ahy11g2128 997 Gene3D - 747 896 IPR036770 -
Ahy11g2128 997 Pfam SBP domain 164 237 IPR004333 GO:0003677
Ahy11g2128 997 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 514 IPR044817 GO:0003677
Ahy11g2128 997 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 513 996 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2128 Ahy-Chr11 133345660 133351709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2128 1 995 SBP-box Gene Family AT3G60030 43.511 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Ahy11g2128 SBP 5.50E-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2128 - - gmx:100776125 1327.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2128 11 133345660 133351709 Ahy11g2128 11 133345660 133351709 ECH
Ahy11g2128 11 133345660 133351709 Ahy1g2689 1 106136961 106142974 hybridization