Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2062 ATGATGGAACTTCCTCAAGCGCGGTCATTTGGAACCGAAGGAAGAAAACCTACGCATGACTTTCTGTCACTCTACAGTAATTCAACTTCCCAACAAGATCCACGACCACCTTCTCAAGGAAGCTACCTCAAGACCCATGATTTCTTGCGAGTAGAAACGAAAGCCAATACAAAGGAAGAAGCCTCGGACGAGACATCATCGACGGTTCAAAAGCTACCACCTGCAGCACCACAACCGCCACCTTCTGTTGAGCACCACCAGCACCTCTTGCCTGGAGGGATTGGAACTTACAGTATTAGCCACATTTCTTATTTTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATCAAAGGGTTCCAAAGCCAGAGGCACCCCTTTTCACTGTGCGTCAAGCAACTAGCACGGATAGAAACGATGAAAACTCCAACTGCAGTTCTTATACCTCAAGTGGTTTCACTCTATGGGATGAGTCTGCAGTTAAGAAGGGAAAGACAGGGAAGGAGAATAATATTGTGGGCGACAAGCTTATTCCCGGAGAGACACAGTCTGCCAAGCAAGGGCATTGGACGTCCACGGAGGGAACGCCACAGTCCTTTTCTAACAATCGTCACAACAGCTTCAACTCTCGCTCTTCCTCTCAGACAACGGGACAGAGGAATCAGAGTTTCATAGAAATGATGAAGTCAGCAAAAGATTGTGCCCAAGATGAAGAGCTAGACAATGAAGAAACATACTTTCTTAAGAAAGAGTCCTCGAATCCTGAAAGAGAACTCAGGGTGAAAGTTGATGGAAAGAGTAGTGATCAAAAGCCAAACACACCAAGGTCAAAACATTCAGCAACAGAACAGCGGAGGAGGAGCAAAATTAATGACAGATTCCAGATGCTACGAGAGTTAATTCCACACAGTGACCAAAAGAGAGACAAAGCATCTTTTTTGCTCGAGGTCATTGAGTATATTCATTTCTTACAAGAGAAGGTGCATAAGTATGAAGGTTCATTCCAAGGATGGAACCACGAGCCAGAAAAACTGATGCCATGGAGGAATAATGACAAGCCAGCAGAGAGTTTTGAAGCTTGTGGCACAAATAGCGGGTCAGGTCCATCACCAACCTTGCTCTTTGCTTCAAAGATCGATGAGAAAAATATCACTCTCTCCCCACCAATTACTGGTAGTTCTCAGAAACTAGAACCTGGCTTGAACACAGCAACTCCCTTCAAGAACATGGATCATCCTCCTGGAATAACAAACAACACTTTCCCAATTCCTATTTCTTCACCGCCAAACTTCTTCCCTCCTAGAAAAAGCATTGGTCTAGGCGAAATGCCTCACGTCACACATAGACTTCCATCTGATGCAGGGAATGGCATATACCAACCTTCAGTGGAGTGTCAGACTGTGACTGCTACTAATGAAAAGTTGAAAGAGAAAGAGCTCGCTATTGAAGGTGGTGCCATTAGCATATCAAGTGTATACTCAAAAGGGTTGTTGGATACACTTACACATGCACTACAGAGTTCGGGAGTGGATTTGTCACAGGCTAGCATCTCAGTGCAAATTGAGCTTCGTAAGCAAGAAAACATTATCAGACCAACTCTGCCAATGTCAATGTGTGGCATTAAGGGCGATGAAGTTCCTTCTAACAATCAAAGGATGATGCGCTCTAGAGTTGCTACCTCTGGGAAATCTGACCAACCAGTAAAGAAGCTAAAGTCTTGCAAAACCTAA 1743 0.4332 MMELPQARSFGTEGRKPTHDFLSLYSNSTSQQDPRPPSQGSYLKTHDFLRVETKANTKEEASDETSSTVQKLPPAAPQPPPSVEHHQHLLPGGIGTYSISHISYFNNNNNNNNNNNNNNNNQRVPKPEAPLFTVRQATSTDRNDENSNCSSYTSSGFTLWDESAVKKGKTGKENNIVGDKLIPGETQSAKQGHWTSTEGTPQSFSNNRHNSFNSRSSSQTTGQRNQSFIEMMKSAKDCAQDEELDNEETYFLKKESSNPERELRVKVDGKSSDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWNHEPEKLMPWRNNDKPAESFEACGTNSGSGPSPTLLFASKIDEKNITLSPPITGSSQKLEPGLNTATPFKNMDHPPGITNNTFPIPISSPPNFFPPRKSIGLGEMPHVTHRLPSDAGNGIYQPSVECQTVTATNEKLKEKELAIEGGAISISSVYSKGLLDTLTHALQSSGVDLSQASISVQIELRKQENIIRPTLPMSMCGIKGDEVPSNNQRMMRSRVATSGKSDQPVKKLKSCKT* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2062 580 MobiDBLite consensus disorder prediction 47 65 - -
Ahy11g2062 580 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 276 350 IPR036638 GO:0046983
Ahy11g2062 580 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 278 328 IPR011598 GO:0046983
Ahy11g2062 580 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 2 577 IPR044295 GO:0003700|GO:0006351|GO:0046983
Ahy11g2062 580 MobiDBLite consensus disorder prediction 1 92 - -
Ahy11g2062 580 MobiDBLite consensus disorder prediction 168 224 - -
Ahy11g2062 580 CDD bHLH_AtBIM_like 277 353 - -
Ahy11g2062 580 MobiDBLite consensus disorder prediction 21 39 - -
Ahy11g2062 580 SMART finulus 284 334 IPR011598 GO:0046983
Ahy11g2062 580 Gene3D - 276 349 IPR036638 GO:0046983
Ahy11g2062 580 MobiDBLite consensus disorder prediction 188 224 - -
Ahy11g2062 580 MobiDBLite consensus disorder prediction 553 571 - -
Ahy11g2062 580 MobiDBLite consensus disorder prediction 548 580 - -
Ahy11g2062 580 MobiDBLite consensus disorder prediction 250 294 - -
Ahy11g2062 580 Pfam Helix-loop-helix DNA-binding domain 280 329 IPR011598 GO:0046983
Ahy11g2062 580 PANTHER TRANSCRIPTION FACTOR BIM1 2 577 - -
Ahy11g2062 580 MobiDBLite consensus disorder prediction 105 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2062 Ahy-Chr11 130688787 130696772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2062 2 530 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 46.448 2.77e-115 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy11g2062 HLH 5.10E-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2062 - - adu:107468970 1092.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2062 11 130688787 130696772 Ahy11g2062 11 130688787 130696772 ECH
Ahy11g2062 11 130688787 130696772 Ahy1g2864 1 109204313 109212305 hybridization