Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2042 ATGAAGCCTCTTTGGTTACCTACCAGTACCAGTGGATCTGTTGTAGCAACCTTACTCCTGTTACTGTTCTCTTGCACCACATTCACTTCCACAGAAGCTTATGATGCACTTGATCCAACTGCCAATATAACAATCAAATGGGATGTCATAACCTGGACTGGAGATGGCTATATTGCTGTTGTTACAATGTACAACTTTCAACAATATCGCCATATCCAGGCGCCGGGATGGACCTTAGGGTGGACATGGGCAAAAAGGGAAGTAATTTGGAACATGCTTGGAGGCCAAACCACAGAACAAGGGGATTGTTCAAGGTTCAAAGGGAGCATCCCACATTGCTGCAAGAAAGATCCAACTGTAGTGGATTTACTGCCAGGAGCACCTTACAATCAGCAGGTAGCAAATTGCTGCAAAGGCGGCGTCTTGAATGCGTGGGCTCAGGACCCTGAAACTGCAGTTGCTTCGTTCCAACTCATTGTCGGTTCGGCTGGAACAACTAACAAAACTGTTAGAGTGCCGAAAAATTTCACCTTGAGAGTGCCGGGCCCAGGTTATACTTGTGGCCCTGCAAAGATTGTGAGACCAACAAAATTTAGCACCAATGACAAGAGGAGAACCACTCAAGCCATGATGACTTGGAATGTTACCTGCACATATTCTCAATTCCTGGCTCAAAAGACTCCAACTTGCTGTGTTTCTCTCTCATCATTCTATAATAATACAATAGTAAATTGCCCAACTTGTACCTGTGGCTGTCAAAACAAAACAGAACCTGGAAGCTGTGTAGATCCAAAGTCTCCGCATTTAGCTTCAGTCGTTTCACCACCAAGCAGAGCTTTGAATCCACCTCTAGTTCAGTGTACAAGCCATATGTGTCCGATTCGAGTGCACTGGCACGTCAAGCTCCAATACAAAGAGTACTGGAGGATCAAGATCACAGTCACAAATTTCAATTACAGAATGAACTATTCACAATGGAACCTTGTTGTTCAGCATCCCAATTTTGACAATGTGACACAGGTTTTCAGCTTTAACTACAAGCCACTGACACCTTATGAGGGCTTAAATGATACAGGTATGCTGTGGGGTGTGAAGTTCTACAATGATTTGTTGGTTTCAGCTGGAGCAGTTGGGAATGTGCAATCAGAACTGTTATTTAGGAAAGACAAATCAAGCTTCACATTTGATAAAGGATGGGCATTCCCAAGAAGGATCTATTTCAATGGAGACAACTGTGTCATGCCACCTCCAGATGCATATCCTTGGCTACCAAATGCAAGTTCAACACTAGTTCTCTCTTTGCTAAGTTCTCTCACTCGGATTCTGGCTTCTTTTCTAGTCTTATCATTTACATGTTAA 1359 0.4349 MKPLWLPTSTSGSVVATLLLLLFSCTTFTSTEAYDALDPTANITIKWDVITWTGDGYIAVVTMYNFQQYRHIQAPGWTLGWTWAKREVIWNMLGGQTTEQGDCSRFKGSIPHCCKKDPTVVDLLPGAPYNQQVANCCKGGVLNAWAQDPETAVASFQLIVGSAGTTNKTVRVPKNFTLRVPGPGYTCGPAKIVRPTKFSTNDKRRTTQAMMTWNVTCTYSQFLAQKTPTCCVSLSSFYNNTIVNCPTCTCGCQNKTEPGSCVDPKSPHLASVVSPPSRALNPPLVQCTSHMCPIRVHWHVKLQYKEYWRIKITVTNFNYRMNYSQWNLVVQHPNFDNVTQVFSFNYKPLTPYEGLNDTGMLWGVKFYNDLLVSAGAVGNVQSELLFRKDKSSFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSTLVLSLLSSLTRILASFLVLSFTC* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2042 452 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Ahy11g2042 452 PANTHER COBRA-LIKE PROTEIN 11 448 - -
Ahy11g2042 452 PANTHER PROTEIN COBRA 11 448 IPR006918 GO:0010215|GO:0031225
Ahy11g2042 452 Pfam COBRA-like protein 57 220 IPR006918 GO:0010215|GO:0031225
Ahy11g2042 452 PIRSF COBRA 8 452 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2042 Ahy-Chr11 129819608 129823248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2042 19 446 COBRA Gene Family AT3G02210 75.581 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2042 - - gmx:100811581 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2042 11 129819608 129823248 Ahy11g2042 11 129819608 129823248 ECH
Ahy11g2042 11 129819608 129823248 Ahy1g2882 1 109578494 109582204 hybridization
Ahy11g2042 11 129819608 129823248 Ahy20g2418 20 129221601 129232082 PCT
Ahy11g2042 11 129819608 129823248 Ahy10g1928 10 104881960 104885179 PCT
Ahy20g2418 20 129221601 129232082 Ahy11g2042 11 129819608 129823248 PCT
Ahy10g1928 10 104881960 104885179 Ahy11g2042 11 129819608 129823248 PCT