Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2040 ATGCTTGGATGGCGTCCTCATCGCTCATCGTTTGTGTTGTTTGTGTATGCACTTAAAGTGACGGCGGCCTTCAACTTCTGGATCCCTGATAACGGCGGAGGTTGGAATCGAAGTGTAATGCATGTCGTATTTTTGGAAGTTTGTGTATGTAGTAGGCAAGTGGAGGCTGTGAGGATGTTGGAAGCATGTTGGATAGTAGATGAGGTGGTAACAATGGCATCAAGTAGCAAGTTTTGCAAGGATTCGTGTATGTGGAATGAGCCTCTTGCGGACAACTGGATGGAGGGCAAGGCTGGTGTGTCGAATCCACAGAACGCATTCCACATAATGCCAGCTGGTAGCGAAATGTTTGTGTTATTCTTTCAGGACACAATGTATGATACAAGAGTGGAGGAAGATGCTGAGTTATCCGATTGGGAGGGGAGGGGGGCTTCAATGTTGCCCGTTTTGTTGGGTTTGGATGGGTTGCAAGCAGAAGATGTTCTTGAAATGGAGTTTTCTTCACCTCAAGAGGCAAGCGGCTTCTATAACAATTACAGCCGACTAAAGGGCTTTGCATCTAGGCGAGGCAAGACGGTTAGAAACACTGCCGGAGAGATAGTGCGGTACACGTTCGTTTGTAATAGGCAGGGATTTCGAGAGAAGAAATGGTTGGAAAAGGTTGATCGCAAAAGGGAGCATAAGGTTGTAACCCGATGCGGATGCATGGCGGAGCTGAGGATAAAGCGGAAAGAGGGTAGTGGGAGGTGGTATGTGTCGCGTTTTGTCGAGGAGCATAACCACGAACTTGCGTATGGGAAGCTTGTTGATTATCTGCGGTCACACAGGAAGATATCTGAGGTAGAAGTTGCTCAGCTAACAAGCATGAGGGAGATTGGGATTAGCATACCTAAGATTTATGAGTCATTCGCAGCACAACTAGGGGGTTTTAATCTGGTAACATTCACAAAACAAGATATGTATAATGAGATACAGAAACAGAGAGGTCTACAAGGCGGAGACGTAACTGCAGCTATTAGTTACTTGGATGGTCTGGCACGCATCGATGGGAAAATGTTTTGGCGGTACAAGTTGGGGTCAGGGCAACAGCTATGCAACTTGTTTTGGAGCGATGGTCGTTGTCAGGAAGATTATGGGATATTCGGCGATGTGCTAGCATTCGACGCTACTTACGGCCGTAACAAGTACAACCTACCGGTTGTAGTCTTTTCCGGAGTAAACCACCACAACCAGACATGCGTATTCGGAACAGCAATGGTCTCATGCGAATCGCAGGAGTCATATATTTGGGTTCTTCGCCAGTTTCTGGAATGCATGCAAGGTAAGGCACCGCATTCCGTCATCACGGATGGAGACCCGGCCATGCGGATAGCAATCCAGTCCGTTTTTCCACACACACATCATCGGTTGTGTGCCTGGCATCTGTTGAGGAACGCGACTGCTAACATAAGCGACCCGAGATTCACACAAATGTTTAGACACTGCATGCTGGCAGATATTGAAATCGAGGAGTTCGAAGCGCATTGGGAATTAATGGTCAATGAGTGCGGTGTTAGGGAGGTTGAGTGGGTTAAGGAGTTGTACGCCAAAAAGCACGCTTGGGCAACCGCATACATTCGTGGTAGATTTTTTGCTGGAGTACGGACAACCTCTAGGTGCGAGTCACTACATGCCAAACTAGGGAGGTTTGTTGAGAGCAGGTACGGGGTGTTAGAATTTGTCAGAAATTTTCAAAGGTGTGTGGACTTTCTTCGTGACACCGAGGACGAGCTAGAGTTTCGTTCATGGTACGGAACACCTGTGCTACAAACGGAGTTTGTTGAGCTGGAAAAGTCTGGATGGAGTATGTTCACCCGCGAAATGTTTCTCAGATTCCGGGATAGCCTGAAACGGTGTGTTCGTGTTAGAATATGCGAACTTAATGACAGTGAGAACCCTCATGCATATACTCTCCAGAAGTATCGGAGGCCTGGGATGAATTGGAAGGTATATAGGGACCATATCTCGAACAGATTTAGTTGCACCTGCATGCGTATGGAGTCGTTTGGCATTCCTTGTGTGCATATCCTTTCCGTGTGTGTAAGTCTAGACTTGGTGGAAATCCCCAAAAGCCTTGTCCTCCGAAGATGGTCTAAGGCAGCCAAATTGGAGATCCATAACCAATGTGTTCAGCAACATACTGCTAACCCAAGTGTGACCTATAGGACACGATTGGGTGCTTTCTCCCAGCTGTGTAAGCGCTTAGGGCGCGTTGCTTGCATGAGTGATGAAGACTTCAAACTTTACTCAAAGAAGCTTTTGAGCGATGCTCTGTTCCTTGAAATAAAGTACGGGTTAAGACCATCAACGGATGATATCACAACAGCAAATGATTGCGGGGTGAAGGACCCTATTCGTGTCAGAACAAAAGGCACGGGTCGGATGAGCCAAGGAGGCGGTTCTGCGTCGAAAACGAAAAGAAAGTGCAGCACATGCGGGAAGCTAGGACACCGGAGGACTAGATGCCCCAACGGAGCCGGGCAAGCGCCAACGAGGAACAATGAATCACATGGTGGAAGAAATAAACGCAAGCGATCTAAGGTACCCGTCGTTGTCCCGGATAATTGTCACGCTGAAAATGCATTTCAAGCCGGAAGCGACAAACGGGATCAATTTTCGCTTGCAGACCCATGA 2673 0.477 MLGWRPHRSSFVLFVYALKVTAAFNFWIPDNGGGWNRSVMHVVFLEVCVCSRQVEAVRMLEACWIVDEVVTMASSSKFCKDSCMWNEPLADNWMEGKAGVSNPQNAFHIMPAGSEMFVLFFQDTMYDTRVEEDAELSDWEGRGASMLPVLLGLDGLQAEDVLEMEFSSPQEASGFYNNYSRLKGFASRRGKTVRNTAGEIVRYTFVCNRQGFREKKWLEKVDRKREHKVVTRCGCMAELRIKRKEGSGRWYVSRFVEEHNHELAYGKLVDYLRSHRKISEVEVAQLTSMREIGISIPKIYESFAAQLGGFNLVTFTKQDMYNEIQKQRGLQGGDVTAAISYLDGLARIDGKMFWRYKLGSGQQLCNLFWSDGRCQEDYGIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGTAMVSCESQESYIWVLRQFLECMQGKAPHSVITDGDPAMRIAIQSVFPHTHHRLCAWHLLRNATANISDPRFTQMFRHCMLADIEIEEFEAHWELMVNECGVREVEWVKELYAKKHAWATAYIRGRFFAGVRTTSRCESLHAKLGRFVESRYGVLEFVRNFQRCVDFLRDTEDELEFRSWYGTPVLQTEFVELEKSGWSMFTREMFLRFRDSLKRCVRVRICELNDSENPHAYTLQKYRRPGMNWKVYRDHISNRFSCTCMRMESFGIPCVHILSVCVSLDLVEIPKSLVLRRWSKAAKLEIHNQCVQQHTANPSVTYRTRLGAFSQLCKRLGRVACMSDEDFKLYSKKLLSDALFLEIKYGLRPSTDDITTANDCGVKDPIRVRTKGTGRMSQGGGSASKTKRKCSTCGKLGHRRTRCPNGAGQAPTRNNESHGGRNKRKRSKVPVVVPDNCHAENAFQAGSDKRDQFSLADP* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2040 890 ProSiteProfiles Zinc finger CCHC-type profile. 820 837 IPR001878 GO:0003676|GO:0008270
Ahy11g2040 890 PANTHER OS02G0262500 PROTEIN 160 735 - -
Ahy11g2040 890 MobiDBLite consensus disorder prediction 807 821 - -
Ahy11g2040 890 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 160 735 IPR031052 GO:0006355
Ahy11g2040 890 Pfam FAR1 DNA-binding domain 175 264 IPR004330 -
Ahy11g2040 890 Pfam MULE transposase domain 384 478 IPR018289 -
Ahy11g2040 890 MobiDBLite consensus disorder prediction 797 867 - -
Ahy11g2040 890 ProSiteProfiles Zinc finger SWIM-type profile. 664 697 IPR007527 GO:0008270
Ahy11g2040 890 SUPERFAMILY Retrovirus zinc finger-like domains 801 841 IPR036875 GO:0003676|GO:0008270
Ahy11g2040 890 SMART 26again6 672 699 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2040 Ahy-Chr11 129751816 129756168 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g2040 MULE 1.10E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2040 - - aip:107611673 1593.17