Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2029 ATGAGTTCAAGCAAAAGCAGCTATGAAGCGAAGCAAGAAGACGAGGGCGGTGGAGGCACTAGCTCTTCAAGACAGTGGACAGCGTTCAGGAATCCAAGAATCGTTCGAGTTTCGCGGTCTTTGGGAGGGAAAGACAGGCACAGCAAGGTTTGCACCATTAGAGGTCTAAGGGACCGGAGAATTCGGCTCTCCGTTCCCACCGCCATTCAGTTGTATGATCTCCAAGACCGACTCGGCCTGGGTCAACCCAGCAAGGTCATTGATTGGTTGCTTCAAGCCACCAAACTCGACATTGATAAGCTACCGCCCCTTCAAATCCCTCCCGGTTTTGCTCAATTTCACCATCACCAAACCCTAATTCCCCTTTCTCATCATCATCAATTCTCCCTTGGCGGCTTCTATGATGCCAATTCCACAAGGTTTTGGGATCTGGATTCTTCTTCAATTAGCCTAAAAGGTAAAGAATCTGATACTATTACTCATCCAGCTGGTGTGATATCTGAGAAAGGAAAATGGATCAAAACAAATCAACATGTTGATGAAAATCAAGACGGATTGTTGTTGCTTAACAATGCTATGGGATATAATTCTCCTTCAGGATTAACTTTATCATCATCCTCCTCATCTTCACAATTTGGAAGCCATGCATTATTGTTTCCTTCACAACAGTTATTGGATCCCCATTCTTCTAATGGCGTGCCTCAATTTTCATCTTCTTCTGCAACAACACCATCAACTTTCACTCCCTATTATGCTCCATTTTTAGCTAATTCGTCATCATCAACAACAACAACAATGGTGGAAAATAATAGTGATGCATTAAGGCAATTCAACCATATTCAGATCTTGAGTTCTCAAGTGATGCCTCATCCCTTTATTCCATCATCTTCTCTTCTTCACTCAATCAATAGTAATAATAATAATAATGATAATAACTCAGCTGCTGCTACTATCAGGCGTATTCCAATGCCATTTAGTTCTAAGCTTCTTGATTCAGATAACAACAACAATGAGAGTAACCAGGAAGATCATAAAGGTACGTAG 1044 0.4176 MSSSKSSYEAKQEDEGGGGTSSSRQWTAFRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLGQPSKVIDWLLQATKLDIDKLPPLQIPPGFAQFHHHQTLIPLSHHHQFSLGGFYDANSTRFWDLDSSSISLKGKESDTITHPAGVISEKGKWIKTNQHVDENQDGLLLLNNAMGYNSPSGLTLSSSSSSSQFGSHALLFPSQQLLDPHSSNGVPQFSSSSATTPSTFTPYYAPFLANSSSSTTTTMVENNSDALRQFNHIQILSSQVMPHPFIPSSSLLHSINSNNNNNDNNSAAATIRRIPMPFSSKLLDSDNNNNESNQEDHKGT* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2029 347 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 345 IPR005333 GO:0003700
Ahy11g2029 347 MobiDBLite consensus disorder prediction 325 347 - -
Ahy11g2029 347 MobiDBLite consensus disorder prediction 1 25 - -
Ahy11g2029 347 ProSiteProfiles TCP domain profile. 43 101 IPR017887 -
Ahy11g2029 347 PANTHER TRANSCRIPTION FACTOR TCP17 2 345 - -
Ahy11g2029 347 Pfam TCP family transcription factor 43 111 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2029 Ahy-Chr11 129310466 129312285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2029 26 186 TCP Transcription Factor Family AT5G60970 54.545 4.54e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy11g2029 TCP 1.70E-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2029 - - cam:101498052 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2029 11 129310466 129312285 Ahy1g2890 1 109774278 109776094 hybridization
Ahy11g2029 11 129310466 129312285 Ahy20g2423 20 129506262 129508228 PCT
Ahy11g2029 11 129310466 129312285 Ahy10g1936 10 105064563 105066393 PCT
Ahy20g2423 20 129506262 129508228 Ahy11g2029 11 129310466 129312285 PCT
Ahy10g1936 10 105064563 105066393 Ahy11g2029 11 129310466 129312285 PCT