Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g2008 ATGGAGAAGCCACCGGAGAATCAGTCCAGCCACTTGAAAAATAACTCCTCCACCACCGCCAACCACCACAAGCAAGAAGGAGTGAATAACAATGGCAACCGAACAAAGTACCGTGGCGTGAGGCAGAGGCAGTCAGGCCGTTACACGGCGGAGATAAGAGACCCTCAGTCCAAGAAGCAGCGGTGGCTCGGCACCTACACCACACCGGAGGAAGCTGCTCGTGCCTACGATGCCGCCGCCCGAGCCCTTCGCGGCCATAAGGCCTGGACCAATTTCCTCGATTACCCTACTAATAACAACAACGACCTCGAAAACCCTAACCCTTTTTTGTCTTTTTCTTCCTCCTCCAACATACTTCTTCTCCGATTTCTTCTGGACTTCATCAACTCCTCCTCCAACCCCTCTTTGGTCTTTTCCGCTCAGCAACTCTACGATCAGTTGTTGCTGAACGGAATAAGCAGCAGCAACAACAACAATAACTGCAGATTAACAGAGACAGTGTTCTCTCACGAGATTATGAGGAACGGTAATTATAATAACTCGGGTGTCCTTTTTGGTCATTTTCCCATGCAAACTGATTTTGATGGTGATTTTAATAATAAGAATAATAACTTTAGTAGTACTAATATGGTTGACAATGGTCATTTGATGGAAGAAGGAAGTGTGTTTCAGTGCCCTGAGATTCATAATCATCATCCTCATGATGAGGAGGATCTTCTTGCGGCATTCTGGATGGATGAAAGTAATACCAGTGTTGATGCGTTCAAATAA 771 0.4617 MEKPPENQSSHLKNNSSTTANHHKQEGVNNNGNRTKYRGVRQRQSGRYTAEIRDPQSKKQRWLGTYTTPEEAARAYDAAARALRGHKAWTNFLDYPTNNNNDLENPNPFLSFSSSSNILLLRFLLDFINSSSNPSLVFSAQQLYDQLLLNGISSSNNNNNCRLTETVFSHEIMRNGNYNNSGVLFGHFPMQTDFDGDFNNKNNNFSSTNMVDNGHLMEEGSVFQCPEIHNHHPHDEEDLLAAFWMDESNTSVDAFK* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g2008 256 MobiDBLite consensus disorder prediction 8 39 - -
Ahy11g2008 256 MobiDBLite consensus disorder prediction 1 62 - -
Ahy11g2008 256 SMART rav1_2 36 100 IPR001471 GO:0003700|GO:0006355
Ahy11g2008 256 ProSiteProfiles AP2/ERF domain profile. 36 93 IPR001471 GO:0003700|GO:0006355
Ahy11g2008 256 SUPERFAMILY DNA-binding domain 36 93 IPR016177 GO:0003677
Ahy11g2008 256 CDD AP2 35 92 IPR001471 GO:0003700|GO:0006355
Ahy11g2008 256 Gene3D AP2/ERF domain 35 93 IPR036955 GO:0003700|GO:0006355
Ahy11g2008 256 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Ahy11g2008 256 PRINTS Ethylene responsive element binding protein signature 59 75 IPR001471 GO:0003700|GO:0006355
Ahy11g2008 256 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 166 - -
Ahy11g2008 256 Pfam AP2 domain 35 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g2008 Ahy-Chr11 127859878 127860648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g2008 35 113 AP2-EREBP Transcription Factor Family AT1G12980 62.025 4.02e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy11g2008 AP2 1.40E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g2008 - - aip:107611489 446.817