Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy11g1993 | ATGGAAGAAGAAGATCATCATCATCAAGAACAAGAACAAGAACTGATGAGGCACGTGTGCAAGTTCTGCAACAAGAGCTTCCCTAGTGGAAGATCCTTAGGGGGTCACATGAGGTCTCACGTGACCAACAACACCCATGAAGCCGAAGAGAAAGAGAAGCTTTCATCATCTGAAGCTGGAACAATCACTAACAACAGCAGTGGCTATGGTTTGAGGGAGAATCCCAAGAAGACATGGAGGATCATTGCGGATTCATCAACTAATAGTGAAGACAACAACAACAACAACAACAACAACAATTCTTCTTCTTTTTCTTCTTTGTTGATGTGTGACAAGCTTTGCAAAGAGTGTGGAAAAGGGTTCAGTTCTTGGAAGGCCTTGTTTGGCCACATGAAACGCCATTCCCACTCTTCTTCTGCTTCTGCCTCTGATCAAGATTCTTGTTGGACAACGAAGAAGCTTCTTGTAATGGATTCACAATCTGATAATGAAGCCACTACTGCTGCTCCTCCAAGAAGGAGAACAAGGTCAAAGAGGAAAACAACAAGAAGGTATAACAATGCTTCTGCTTCGACGACTAGTTTTGCTGCGAAAACTTCTTGTTCTGTTTACTCTGAGGCTGAGGCTGAGGTTGAGATTGAGCAGGAGCAAGAAGAGGTTGCTATGAGCTTGATGATGCTTAGTAGAGATGTTGGTAATTGGTGGAGTGCTGGTGATGGTGGTGTTCATTCTCTTGCCGAGTCTTCTTCGGTTTTTAGGACTAGAATTCAGGACAAGAAGATGATGAAGATCAATGCTTGTTCTGAGGTTGGAAGAGTAGGAAGAAGCGCAGAACTTTTGGATTTGGATTTGGAGGATGATGGATTTGAACATGGCAAGAAGTACAGTTCAATCAAGGAGAAGATTTCGGATTATTCGAATTCGAATTCGGCTAATAAGAGGGGAAAGTTTGAGTGTACTACTTGCAAGAGGATCTTCCATTCTTATCAAGCACTTGGAGGGCATAGAGCAAGTCACAAGAAGATTAAGGGTTGCTTTGGTTCAAACAATGATAACAGCATTCAGATTGAGATTGAGATTGAGACTGAACTCTCTCCTAACAACAAAATTGAGAGTTTAGAGAATGAACAACTTGGTTTTGATGATTATGATGATGAAGATGATGATGATGAGGCTGAAGAAGAAGATAACAAGACAGCAAAGAAGGTAAACAAAGTTCATGAGTGTCCAATTTGCCTGAAAGTTTTTGCTTCTGGACAAGCATTGGGTGGACACAAGAGATCTCACACTGCCAAAATTGAGGAACAGGAAGAAGAACAAGTTCAAGAAATTAGGGTTAGGGATTTGCTTGATCTGAATGTTCCAGCAGCAGCAGCTACTACTACTGAAGAGGATGAAGCTAACAACAGTTTCAATGCTGATTCTAATAATAATAAGAGGCATTGGTGGGAAGAGGCACCACTGCTAGGACTTATCTCTCTTAACTAA | 1488 | 0.4153 | MEEEDHHHQEQEQELMRHVCKFCNKSFPSGRSLGGHMRSHVTNNTHEAEEKEKLSSSEAGTITNNSSGYGLRENPKKTWRIIADSSTNSEDNNNNNNNNNSSSFSSLLMCDKLCKECGKGFSSWKALFGHMKRHSHSSSASASDQDSCWTTKKLLVMDSQSDNEATTAAPPRRRTRSKRKTTRRYNNASASTTSFAAKTSCSVYSEAEAEVEIEQEQEEVAMSLMMLSRDVGNWWSAGDGGVHSLAESSSVFRTRIQDKKMMKINACSEVGRVGRSAELLDLDLEDDGFEHGKKYSSIKEKISDYSNSNSANKRGKFECTTCKRIFHSYQALGGHRASHKKIKGCFGSNNDNSIQIEIEIETELSPNNKIESLENEQLGFDDYDDEDDDDEAEEEDNKTAKKVNKVHECPICLKVFASGQALGGHKRSHTAKIEEQEEEQVQEIRVRDLLDLNVPAAAATTTEEDEANNSFNADSNNNKRHWWEEAPLLGLISLN* | 496 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy11g1993 | 495 | Gene3D | Classic Zinc Finger | 314 | 429 | - | - | |
Ahy11g1993 | 495 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 18 | 45 | IPR013087 | - | |
Ahy11g1993 | 495 | MobiDBLite | consensus disorder prediction | 159 | 189 | - | - | |
Ahy11g1993 | 495 | MobiDBLite | consensus disorder prediction | 28 | 76 | - | - | |
Ahy11g1993 | 495 | SUPERFAMILY | beta-beta-alpha zinc fingers | 113 | 339 | IPR036236 | - | |
Ahy11g1993 | 495 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 114 | 136 | IPR013087 | - | |
Ahy11g1993 | 495 | MobiDBLite | consensus disorder prediction | 57 | 72 | - | - | |
Ahy11g1993 | 495 | Gene3D | Classic Zinc Finger | 4 | 68 | - | - | |
Ahy11g1993 | 495 | Pfam | C2H2-type zinc finger | 317 | 341 | - | - | |
Ahy11g1993 | 495 | Pfam | C2H2-type zinc finger | 406 | 430 | - | - | |
Ahy11g1993 | 495 | Pfam | C2H2-type zinc finger | 17 | 40 | - | - | |
Ahy11g1993 | 495 | Pfam | C2H2-type zinc finger | 114 | 134 | - | - | |
Ahy11g1993 | 495 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 112 | 139 | IPR013087 | - | |
Ahy11g1993 | 495 | SMART | c2h2final6 | 112 | 134 | IPR013087 | - | |
Ahy11g1993 | 495 | SMART | c2h2final6 | 317 | 339 | IPR013087 | - | |
Ahy11g1993 | 495 | SMART | c2h2final6 | 18 | 40 | IPR013087 | - | |
Ahy11g1993 | 495 | SMART | c2h2final6 | 407 | 429 | IPR013087 | - | |
Ahy11g1993 | 495 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 407 | 434 | IPR013087 | - | |
Ahy11g1993 | 495 | SUPERFAMILY | beta-beta-alpha zinc fingers | 17 | 45 | IPR036236 | - | |
Ahy11g1993 | 495 | MobiDBLite | consensus disorder prediction | 374 | 401 | - | - | |
Ahy11g1993 | 495 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 319 | 339 | IPR013087 | - | |
Ahy11g1993 | 495 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 409 | 429 | IPR013087 | - | |
Ahy11g1993 | 495 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 11 | 493 | - | - | |
Ahy11g1993 | 495 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 317 | 344 | IPR013087 | - | |
Ahy11g1993 | 495 | SUPERFAMILY | beta-beta-alpha zinc fingers | 404 | 432 | IPR036236 | - | |
Ahy11g1993 | 495 | MobiDBLite | consensus disorder prediction | 42 | 56 | - | - | |
Ahy11g1993 | 495 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 20 | 40 | IPR013087 | - | |
Ahy11g1993 | 495 | MobiDBLite | consensus disorder prediction | 377 | 394 | - | - | |
Ahy11g1993 | 495 | PANTHER | C2H2-TYPE ZINC FINGER PROTEIN | 11 | 493 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy11g1993 | Ahy-Chr11 | 127324481 | 127326743 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy11g1993 | 400 | 457 | C2H2 Transcription Factor Family | AT1G26610 | 52.459 | 6.84e-12 | 65.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Ahy11g1993 | zf-C2H2_6 | 5.70E-12 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy11g1993 | - | - | aip:107619267 | 844.728 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g1993 | 11 | 127324481 | 127326743 | Ahy1g2915 | 1 | 110372361 | 110374497 | hybridization |