Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1959 ATGGCTTCTTGCAACTACTTCTTCAACCCTCAACAAACAGATGAATATCCTTTCCCACTTCCCATTCAATTTTCCTTGTATGATTATGATTATTACTATTATTCCAGTGGAAACAGTAACGAATATCCACCACTGGAATGTTGGGCACACGAGTTTTCAATACAAGACATGGAGTGTTACCCTTCACTTCCTTTTTATGAAACTCTCTCCGTCGAACCAATTTCAACTATTAAAGACTATGACTTTTATGATATTAAGAAAGGGTTTTCTGTCTGGAACGAAGTGGATGCCGGCTTTGATTGTTCGGAAAAAGTAGTTTCGTCATCATCATCACTTTCCAACAACAACAATGAAGAAGACAAGAGAATCAGGAGGGTTATGAATAAACGAGTTTGTAGAGAAGTGAGAAGTAGCAACAGTACGAAAATGTTATCAAGAAAGATGATATCCGAGTATTTCTACATGCCAATAACTCAAGCAGCGAAGGAACTTGATGTGGGCTTAACTCTTCTGAAGAAGAGATGCAGAGAGTTAGGGATTCGAAGGTGGCCCCATCGAAAACTTATGAGCCTTCAAACCCTCATCAATAATGTTCAGGAGCTAGGGAAGGACGAGGGGACAGAGAGTGAAGAGAAGCTAAGGAATGCAATTGAGATATTAGAGAAGGAAAAGAAGCTTCTGGAAGAAATGCCTGATTTGCAACTTGAAGACAATACCAAAAGGCTTAGACAAGCATGTTTCAAGGCCAACTACAAGAAGAGGAAGCTAATAATGGGTAGTAGTTCTTCAAATTCATCCATGGAATCTTCTTCATCATATAACATTATTGGACATAATGCAACAAGAATAACTAGTTGTAAAGGAGGCACAATGGATAGTATTGGATTTATTAGCTTTGAGGATGAAGAAGATCAAGAACGTGACATCAAATCTGTGTTGTCTTTGCCTCCTTTGTCCCATAACAATTAA 969 0.3839 MASCNYFFNPQQTDEYPFPLPIQFSLYDYDYYYYSSGNSNEYPPLECWAHEFSIQDMECYPSLPFYETLSVEPISTIKDYDFYDIKKGFSVWNEVDAGFDCSEKVVSSSSSLSNNNNEEDKRIRRVMNKRVCREVRSSNSTKMLSRKMISEYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKDEGTESEEKLRNAIEILEKEKKLLEEMPDLQLEDNTKRLRQACFKANYKKRKLIMGSSSSNSSMESSSSYNIIGHNATRITSCKGGTMDSIGFISFEDEEDQERDIKSVLSLPPLSHNN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1959 322 ProSiteProfiles RWP-RK domain profile. 127 211 IPR003035 -
Ahy11g1959 322 PANTHER PROTEIN RKD1-RELATED 48 270 - -
Ahy11g1959 322 PANTHER PROTEIN RKD4 48 270 IPR044607 GO:0003700
Ahy11g1959 322 Pfam RWP-RK domain 144 191 IPR003035 -
Ahy11g1959 322 Coils Coil 203 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1959 Ahy-Chr11 126017197 126018801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1959 130 255 AtRKD Transcription Factor Family AT1G18790 69.531 7.29e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy11g1959 RWP-RK 2.00E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1959 - - adu:107470725 501.901