Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1933 ATGGAGAGGGAGGATCTGAATTTGAACAAAGATAGTAATAACAACGGTGTTGGAGGTAATAACAGTAAGAGTGGCGGTGATGGCTTCATTGACAGAAGCAAAGTTAGGATTTTGTTGTGTGATAACGATTCCAAGAGTTCCGAAGAGGTTTTTACTCTTCTAATTCGATGCTCTTATCAAGTTGTTTCTGTAAAGTCAGCAAGGCAAGTAATTGACGCACTGAATGCAGAGCGACAATATATAGACATCATACTAGCTGAAGTCGACCTTCCGATAAAAAAGGGCATGAAGATGCTTAAGTACATAGCACGCGACAAAGAATTGCGCCGAATTCCTGTTATAATGATGTCTGCACAAGATGAGGTATCCATTGTTGTTAAGTGCTTGAAACTTGGAGCAGCAGACTATCTAGTTAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGACGCATGCTTGGACTTGTAGAGAACAACATCTTGAATTATGACTTTGACCTGGTAGTGTCTGACCCGAGCGATGCCAATACAAACAGTACCACCTTATTTTCTGATGACACAGATGATAAGTCCAAAAGAAGCAGTAATCCAGAGGCGGGAATATCTATCCAACAACAAGAGGCTACTGTTGCCATGGATATTGTTGTTGAGGAGCATCCTAATTCTTTGGTGTCGCCTGATGTGCCTGGAATTAGTGATCGCCGAACAGGTGCTCAGGGGCAGCATCAATCATACAACAATATTACTGAGGGTTATTTTTCATCTGCTCCAAAGAAGAGTGAACTAAGGATAGGAGAATCATCAGCCTTCTTCACTTATGTCAAAGCCACAACAATAAGGAGCGACATTGAAGAGATTGTTCATCTTGACAAGAATGCTACTAAACAAGTGAGGATGGAAGACATGGATCAAGCATGTGCTCAAGAGAGGGGTAACCTTCAAAGACCTGAGAATGGAGAGACACTTGAAAGCCATTCACAAGAGGACTTGCCCAGCAGCAATAGTATACCTGATTCTTTTTCTATTGAGAGATCTTGCACTCCTCCTGCATCAGTGGAAGTTTCACAGCAAAAGCATTACAAGGAAGAGCATCGTCAGGGTGTGGTGCATCCAAGAAATGGAAGCCATGGTTCCGAGCCTGATGCATCTAGCATGAATGCTCACCATGCTTATCCATATTATATGTCAGGAGTTGTTAATCATGTTATGATGCCATCGTCAGCACAACTGTATCAAAAGAATATGCAGGAGCTACAGAATCATACGAGTTCGTCTATGATTGCACAATACAATCATCTTCCCCACTGCCCTCCTCATGCAAACGGGATGACGTCCTTTCCATATTATCCAATGGGTATATGCTTACAGCCTGGTCAGATTCCTGCGAATCATTCATGGCAACAATTAGGAGGTTCGAGTTCATCAGAGATGAAATTAAGCAAAGTTGATAGAAGAGAAGCGGCGTTGATGAAGTTTAGACAGAAAAGGAAAGAACGTTGTTTTGATAAGAAAATTAGGTATGTCAATAGGAAACGACTGGCTGAGAGGCGGCCCCGTGTTAGGGGACAATTTGTCAGAAAGTTGAATGGTGTCAATGTGGATCTCAATGGACACCCTGCCTCCACTGATTATGATGACGAAGATGACGATGAGGAGGAAGAAGACAACCACGTAGCAAATGATTCCTCTCCTGAGGATGCATGA 1725 0.4249 MEREDLNLNKDSNNNGVGGNNSKSGGDGFIDRSKVRILLCDNDSKSSEEVFTLLIRCSYQVVSVKSARQVIDALNAERQYIDIILAEVDLPIKKGMKMLKYIARDKELRRIPVIMMSAQDEVSIVVKCLKLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVENNILNYDFDLVVSDPSDANTNSTTLFSDDTDDKSKRSSNPEAGISIQQQEATVAMDIVVEEHPNSLVSPDVPGISDRRTGAQGQHQSYNNITEGYFSSAPKKSELRIGESSAFFTYVKATTIRSDIEEIVHLDKNATKQVRMEDMDQACAQERGNLQRPENGETLESHSQEDLPSSNSIPDSFSIERSCTPPASVEVSQQKHYKEEHRQGVVHPRNGSHGSEPDASSMNAHHAYPYYMSGVVNHVMMPSSAQLYQKNMQELQNHTSSSMIAQYNHLPHCPPHANGMTSFPYYPMGICLQPGQIPANHSWQQLGGSSSSEMKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGHPASTDYDDEDDDEEEEDNHVANDSSPEDA* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1933 574 MobiDBLite consensus disorder prediction 318 391 - -
Ahy11g1933 574 SMART REC_2 35 150 IPR001789 GO:0000160
Ahy11g1933 574 MobiDBLite consensus disorder prediction 1 25 - -
Ahy11g1933 574 MobiDBLite consensus disorder prediction 185 208 - -
Ahy11g1933 574 MobiDBLite consensus disorder prediction 538 574 - -
Ahy11g1933 574 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 557 IPR045279 GO:0009736
Ahy11g1933 574 MobiDBLite consensus disorder prediction 363 377 - -
Ahy11g1933 574 ProSiteProfiles Response regulatory domain profile. 36 154 IPR001789 GO:0000160
Ahy11g1933 574 PANTHER RESPONSE REGULATOR AND TRANSCRIPTION FACTOR RR-A-TYPE FAMILY-RELATED 4 557 - -
Ahy11g1933 574 MobiDBLite consensus disorder prediction 321 361 - -
Ahy11g1933 574 Pfam CCT motif 492 534 IPR010402 GO:0005515
Ahy11g1933 574 Pfam Response regulator receiver domain 37 148 IPR001789 GO:0000160
Ahy11g1933 574 Gene3D - 35 229 - -
Ahy11g1933 574 MobiDBLite consensus disorder prediction 550 566 - -
Ahy11g1933 574 SUPERFAMILY CheY-like 33 161 IPR011006 -
Ahy11g1933 574 ProSiteProfiles CCT domain profile. 492 534 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1933 Ahy-Chr11 125195546 125200619 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1933 20 573 Response Regulator Gene Family AT5G61380 51.981 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Ahy11g1933 Response_reg 1.20E-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1933 K12127 - gmx:100786522 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1933 11 125195546 125200619 Ahy11g1933 11 125195546 125200619 ECH
Ahy11g1933 11 125195546 125200619 Ahy1g2943 1 110849249 110854250 hybridization