Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1907 ATGGCTTCTTGCAACTTCTTCAACCCTCAACAAATAGATGATCCTTTCCCACTTCCCCCCCAATTTTCCTTATATGATTATGATTATTATTCTTTCTGTGGAAACACTAACGAATATCCACCACTGGGATGTTGGGCACACGAGTTGGAGTGTTACCCTTCACTTCCTTTTTATGAAACTCTTTCCATCGAGCCAATTTCAACTATTAAAGACTGTGACTTTTATGATATCAAGAAAGGGTTTTCTGTCTGGAACGAAGTGGATGTCGGCTTTGATTGTTCGGAAAAAATTTCATCATCATCATCATCACTTTCCAACAATAACAATGAAGAAAATAAGAGCATCCGGAGGGTTATGAATAAACGAGTTTGTAGAGAAGAGAGAAGTAGCAACAGTACGAAAATGTTATCTAGGAAGATGATATCGGAGTATTTCTACATGCCAATAACTCAAGCAGCGAAGGAACTTGATGTGGGCTTAACTCTTTTAAAGAAGAGATGCAGAGAGTTAGGGATTCGAAGGTGGCCCCATCGGAAACTTATGAGCCTTCAAACCCTCATCACTAATGTTCAGGAGCTAGGGAAGGAAGAGGGGAGAGAGAGTGAAGAGAAGCTAAGGAATGCAATTGAGATATTGGAGAAGGAAAAGAAGCTTCTGGAAGAAATGCCTGATATGCAACTTGAGGACAATACCAAAAGGCTTAGGCAAGCATGCTTCAAGGCTAATTACAAGAAGAGGAAGCTCATGATGGGTTGTACTTCTTCAAATTCATCCGTGGAATCTTCGTCTTCATCATCATATCATATTATTGGACATAATGCATTAAGAACAGCTAGTCAGAGTAACACAATGGGTGGTGTTGAATTTATTAGCTTTGATGATGATGAAGATCAAGAACGAGACATCAAATCTGTGTTGTCTTTGCCTTCTTTGTCCCACAACATTCAAATGTGTTCTAGCTATATGTTTAATCACCCAAGTGGTGAATGA 990 0.3929 MASCNFFNPQQIDDPFPLPPQFSLYDYDYYSFCGNTNEYPPLGCWAHELECYPSLPFYETLSIEPISTIKDCDFYDIKKGFSVWNEVDVGFDCSEKISSSSSSLSNNNNEENKSIRRVMNKRVCREERSSNSTKMLSRKMISEYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSLQTLITNVQELGKEEGRESEEKLRNAIEILEKEKKLLEEMPDMQLEDNTKRLRQACFKANYKKRKLMMGCTSSNSSVESSSSSSYHIIGHNALRTASQSNTMGGVEFISFDDDEDQERDIKSVLSLPSLSHNIQMCSSYMFNHPSGE* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1907 329 Pfam RWP-RK domain 136 183 IPR003035 -
Ahy11g1907 329 PANTHER PROTEIN RKD4 56 263 IPR044607 GO:0003700
Ahy11g1907 329 ProSiteProfiles RWP-RK domain profile. 119 203 IPR003035 -
Ahy11g1907 329 Coils Coil 195 222 - -
Ahy11g1907 329 PANTHER PROTEIN RKD1-RELATED 56 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1907 Ahy-Chr11 124264101 124265873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1907 122 247 AtRKD Transcription Factor Family AT1G18790 69.531 4.52e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Ahy11g1907 RWP-RK 2.10E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1907 - - adu:107470725 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1907 11 124264101 124265873 Ahy11g1907 11 124264101 124265873 ECH
Ahy11g1907 11 124264101 124265873 Ahy1g2961 1 111176175 111177871 hybridization