Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1890 ATGTCGATGGAACAAGCAATTTGTGAAGGCGCATCGTACGGCACAGCATATGATGATAGTGATCAGTATAATTCATGCGATGTTAATGTTCCATCGCTTAGTGAAGATGACACACAACATGTGGACAAGGGAAAAGAATCTGGAAGCGTTATTGAAGTAGTGGACGATGCAATGGCAGTGAATCATGAGTTACCCGATCACACTGGAATTCCATTAGATGAAATCCCGTACGTAGGATTGAGATTTGTTTCCTTGCAGCGGGCACAAGAGTTTTACACTAATTATGCAAAGAAAGTTGGCTTCGTGACCAGAATTCGGAATACCAACTTTGACAAGACTAGGAAGGATTCAAAGATACCCGTTAACCAATCGTTACACTGTAGTCATGAAGGTTATCGGGAGTCTCGAGCGAAGGCAACAACTCGAGTAAAGAGAATAACAACAGCCGGATACAAAGCAAGGATGTACGTCATGCTTGATAGGCAGAAGGATAATTGGATGGTTTCCAAACTAGAACTGAAGCACACCCACCCGTGTTCTGCCAAGCAAGCTGTGCACTACACTGAGTACATGGAACTGACCATGCATGCCAAGTGTGTAATTCAGAACAATGATGAGGCTGGCATATGGCCCAACAAGACTTATCTCGCACTGGCGAACGAGGTTGGTGGCTCGTCGAATTTGGGTTACTCAGAAAAGGATGTGAGGAACTTCATTACGAGCAATTTGCGCTTTGATGTAGACGAAGCTAACCAGTTTAAAAGTGCGCTCTGGGTAGATGCAAGATGCAGGGCTTCCTATGAATATTATGTTGATTTGGTATCATTTGATACAACGTACTGTAGAAACAAGCACGGACTTCCATTTGCATCTTTTGTTGGCGTTAACCATCATGGCAAGTCCACTCTGCTCGGATGTGCTTTGATGGGAAATGAGGAAATTTGTTGCTTCGAGTGGGTCTTTAAGCAATGGTTGAGGTGCATGGGATCTCCCCCACAGGCCATCATCACGGATCAGTGCAAATCCATGTTTGGTGCTATCAAGAATGTCCTTCCAGATACTCGCCACCGATGGTGCATATGGCACATAATGAAAAAGATACCGCATAAGCTCGGAGGATATGCTCGGTATAAAGAAATAGATGATAGAATGCATGGCACTGTTTGGAATGCCAGTGGGTGTGTTATGGAATCTCTGTATGGTGATTATAACTTTTTTTCTGTTGGTTATGTAGACCTTTATGACGAACGTCGAATGTGGGTTCCAATCTATTTTCAAGGTAAATTTTGGGCAGGTATGAGAAGTACTCAACGGAGTGAGAGCATGCACGCCTTTTACGGTGGTTACTTGCATTGCAAGAGTAGACTGGTTCAGTTCATGCATGAGTATGATAACGTGCTTGGGAACAAGGAGCAAAAGAAACTGGAAGATGATGCTGTAGACTCTAAAGGAGTTGTTCCTTGTTCATCGAGTACTACAATTGAAAGACAATTTCAGCGTGAGTACACAACCTCTAAGTTTAGGGAAGTACAACAGGAATTCAGGAAAAAAGGGGATTGTTTAGTCCGTGGTGCGACTCACGAGGGTGATTTATTTCGTGTGATCATGAAAGAGCAATACATATTATATAGGGAACCTAGGTCCTGGAACAATAATGTTGAGTTTGATCCATCGATACACAAGATTCGGTGTGAGTGCAACATGTTTGCATCGAGAGGTATTCTTTGTTGTCACTGTCTTGCTGTTTACTTTTATTACGGAGTAGACAGAGTACCATCTTGCTATGTTCTTCCTCGATGGAGCAAGAATGTACAGCGGAAACACACTTTCATTAAGAGTAGGCATGACGAGAAGCGATCGGATGAAAGCCACAACTTATTTAGAAGACTGTCTACGCACTTCTTTAATGTGGCACAGGAATTCGTGACATGCGAAGAAGAGGCGGCCATGTTACATTCGGGTCTTGATGAGTTAAGGGCCAAGTTGGTTGATTATCGTGCGAACTTGGGCTCCAGAAGTGTTCCCAATACAGATAACAACATGGTGACACAGTCTGACCCAGCTTGTGTTGCATCTGACATTCAAGGTCCCTCTAAGGTTGTAACAAAGGGTCGACCGAGACTAAAGAGGCTTGGATCTGAACAGGATACATCCATTAAGAGATCTATGCGAAAGTGTCTACCAGAAAATAATGGAGCAATCAATCCAAACATAGTGGCGGTTCCTGCTCTGAGCGCGAATGAATCACATGGAAATGGCGGGTTCTTGTCTTTGTTACACTCATTTCGACATAGTTAG 2298 0.4343 MSMEQAICEGASYGTAYDDSDQYNSCDVNVPSLSEDDTQHVDKGKESGSVIEVVDDAMAVNHELPDHTGIPLDEIPYVGLRFVSLQRAQEFYTNYAKKVGFVTRIRNTNFDKTRKDSKIPVNQSLHCSHEGYRESRAKATTRVKRITTAGYKARMYVMLDRQKDNWMVSKLELKHTHPCSAKQAVHYTEYMELTMHAKCVIQNNDEAGIWPNKTYLALANEVGGSSNLGYSEKDVRNFITSNLRFDVDEANQFKSALWVDARCRASYEYYVDLVSFDTTYCRNKHGLPFASFVGVNHHGKSTLLGCALMGNEEICCFEWVFKQWLRCMGSPPQAIITDQCKSMFGAIKNVLPDTRHRWCIWHIMKKIPHKLGGYARYKEIDDRMHGTVWNASGCVMESLYGDYNFFSVGYVDLYDERRMWVPIYFQGKFWAGMRSTQRSESMHAFYGGYLHCKSRLVQFMHEYDNVLGNKEQKKLEDDAVDSKGVVPCSSSTTIERQFQREYTTSKFREVQQEFRKKGDCLVRGATHEGDLFRVIMKEQYILYREPRSWNNNVEFDPSIHKIRCECNMFASRGILCCHCLAVYFYYGVDRVPSCYVLPRWSKNVQRKHTFIKSRHDEKRSDESHNLFRRLSTHFFNVAQEFVTCEEEAAMLHSGLDELRAKLVDYRANLGSRSVPNTDNNMVTQSDPACVASDIQGPSKVVTKGRPRLKRLGSEQDTSIKRSMRKCLPENNGAINPNIVAVPALSANESHGNGGFLSLLHSFRHS* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1890 765 Pfam MULE transposase domain 274 366 IPR018289 -
Ahy11g1890 765 Pfam SWIM zinc finger 561 586 IPR007527 GO:0008270
Ahy11g1890 765 ProSiteProfiles Zinc finger SWIM-type profile. 549 587 IPR007527 GO:0008270
Ahy11g1890 765 Pfam FAR1 DNA-binding domain 90 179 IPR004330 -
Ahy11g1890 765 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 650 IPR031052 GO:0006355
Ahy11g1890 765 PANTHER OS03G0843700 PROTEIN 47 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1890 Ahy-Chr11 123754054 123757254 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g1890 MULE 3.00E-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1890 - - ahf:112772717 1431