Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1889 ATGGAGGGAGGTGATGACTTCCACCACCATCACCATCATCACCAACACCACCACCACCGACAGAACTTCCCCTTCCAACTTCTAGAGAAGAAAGAAGATCAAGAAGCAGCGTCATGCTCAACTTCCTCCCCTTACCCTTCCCTAGCTATCTCATCTGCAGAACCATCCACTTCGAATTCAAACCGATCGAATCCAAACAGCAACACTGCAAACAACAACAATAACAACAGCAACAACAACCAATTAGCCTTACAACAAGAACAGCAAATACAGCCTTCTTTATCCTCTGAACCTTCTGGAAAGAAGCCTCCTCCTAAGCGGACATCCACCAAGGACCGCCATACAAAAGTTGACGGCCGTGGCCGCCGCATCCGAATGCCAGCTCTCTGTGCAGCCAGGGTGTTCCAGCTGACACGAGAGCTCGGCCACAAGTCCGATGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCGGAGCCAGCCGTGATCGCCGCCACCGGAACCGGAACAATCCCCGCAAACTTCACGTCCCTCAACATCTCCCTCCGCAGCAGCGGTTCCTCCATGTCCGTACCATCCCAGCTCCGATCCTCATACTTCAGCCCTAACTTCCCCCTCCAAAACCGCCGAACCTTGTTCCCCGGAATAACCCTCTCGTCCGACACCACCACCGCCAGTAACAACAACAACAACAGCAACAACAACACCACCACTCTCCTTAACTTCCAACAGCAACAGCAAACCCTAACCGCAAATATTTTCAAGCAAGAACTGAGAGAGAGCCATGGCGCTCCCTCTTCTTCTTCCACGTTGGATTTATCTGAAACAAGCGCGGAAGAAGGTTCGCTAGGGAGAAAGAGAAGGCCGCCATCGGAACACGACCTATCTTCTTCAGCACAGCACCAAATGGGAAGCTACCTGCTGCAATCAAGCGCAGGCGCGATTCAGGCGAGCCACGCAGCTCAGATTCCGGCCAACATATGGATGGTGGCGAATTCCCAAAATGCCCCTCAGGTTATGAGCGGTGACCCTATATGGACGTTTCCAACGCAGGTTAGTAACAGTGGGTTGTACCGTGGAACCGTTTCCAGTGGTTTGCACTTTATGAACTTCCCTACTCCTATGGCTTTGTTGCCGAGTCAGCAATTAGGTTCTTCCGGTGGCGGAGGCAGTGTCAACGAAAGCCATTTGAATATGATCGCCGGTCTCGGCAGTTACCGTCCGGTCATCGGAGTTTCAGAATCGTCTCAGGCCAGTGGCTCTCATCAACATCATCGAGATGGAACCGATGATCGACACGATAGTACCAGCCACCACTCTTGA 1320 0.5265 MEGGDDFHHHHHHHQHHHHRQNFPFQLLEKKEDQEAASCSTSSPYPSLAISSAEPSTSNSNRSNPNSNTANNNNNNSNNNQLALQQEQQIQPSLSSEPSGKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFSPNFPLQNRRTLFPGITLSSDTTTASNNNNNSNNNTTTLLNFQQQQQTLTANIFKQELRESHGAPSSSSTLDLSETSAEEGSLGRKRRPPSEHDLSSSAQHQMGSYLLQSSAGAIQASHAAQIPANIWMVANSQNAPQVMSGDPIWTFPTQVSNSGLYRGTVSSGLHFMNFPTPMALLPSQQLGSSGGGGSVNESHLNMIAGLGSYRPVIGVSESSQASGSHQHHRDGTDDRHDSTSHHS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1889 439 ProSiteProfiles TCP domain profile. 110 164 IPR017887 -
Ahy11g1889 439 MobiDBLite consensus disorder prediction 258 299 - -
Ahy11g1889 439 MobiDBLite consensus disorder prediction 412 439 - -
Ahy11g1889 439 MobiDBLite consensus disorder prediction 216 236 - -
Ahy11g1889 439 MobiDBLite consensus disorder prediction 104 123 - -
Ahy11g1889 439 MobiDBLite consensus disorder prediction 1 124 - -
Ahy11g1889 439 MobiDBLite consensus disorder prediction 258 276 - -
Ahy11g1889 439 MobiDBLite consensus disorder prediction 419 439 - -
Ahy11g1889 439 MobiDBLite consensus disorder prediction 22 36 - -
Ahy11g1889 439 MobiDBLite consensus disorder prediction 278 293 - -
Ahy11g1889 439 Pfam TCP family transcription factor 108 247 IPR017887 -
Ahy11g1889 439 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 439 IPR005333 GO:0003700
Ahy11g1889 439 MobiDBLite consensus disorder prediction 37 97 - -
Ahy11g1889 439 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 12 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1889 Ahy-Chr11 123697086 123699113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1889 95 381 TCP Transcription Factor Family AT3G47620 47.714 9.86e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Ahy11g1889 TCP 2.20E-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1889 - - pvu:PHAVU_003G190900g 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1889 11 123697086 123699113 Ahy11g1889 11 123697086 123699113 ECH
Ahy11g1889 11 123697086 123699113 Ahy1g2973 1 111395901 111397912 hybridization
Ahy5g1654 5 45333520 45335859 Ahy11g1889 11 123697086 123699113 PCT