Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1880 ATGGGAAATTGCATTCGAGAAAGTTCTGATATCACCACGCCATACCCAAATAATCCTATAGGTGCTACAAAAGGAGGTTATTATAGAAAAAGAAGCACATTATTGTTACCACCACCACCAATACAACATGTTGATGATGATGATTATGGTAAAGATGATGAGATTGTTCTAGCAACATCAAGATCTGAAGGCGACATACTACTAATTTCATCCCCTCATTTAAAATCCTTCACATTCAATAATCTTAAGAATGTTACTGGAAACTTTGATCATGAGAATCTAATAGGAGAAGGTGGATTTGGTTATGTTTATAAGGGATGGATTAATGCTCATTCATTTGACCCTACCTTTGGAATTGGAACTGTTGTTGTAGCTGTAAAGAAGCTTAAACCTCAAGGTTTTCAAGGTCATAAGGAGTGGTTGAGTGAAGTAAATCATCTTGGACAACTTCATCATCCAAATCTAGTGAGACTTATTGGATACTGTTTTGAAGGGGATAATCGACTTCTGGTGTATGAATACATGCCAAAAGGAAGCTTAGAAAATCACCTATTTCATAAGGGGAATGAAACGCTTCCTTGGACAACAAGAATGAAAGTTGCTATTGATGCTGCTAGAGGACTAACCTTCCTACATGAATCTGAGCAACAAGTCATCTACCGAGACTTCAAGACTTCTAACATTTTATTAGATTTGGAATTTAATGCAAAACTTTCTGATTTTGGATTGGCGAAAGCAGGGCCCATTGGTGATCGAAGTCATGTTTCTACTCAGGTCTTGGGCACTGTAGGTTATGCTGCTCCTGAATATATCCTTACAGGTCGGCTAACTACAAAATGTGACGTGTATAGTTTTGGAGTAGTACTATTGGAATTACTAACTGGACGGCGTGCAATTGAGGTAACAAAATCTGGGATGGAACATAATCTTGTGGAATGGGCAAAACCCTATTTGGGTGATAGGAGGAAGTTGTTCAGGATCATGGACACTAAGTTAGCAGGACAATACTCACAAAGGGCAGCTTATATAGTTGCTCTTCTTGCTTTGCAATGCATTAGTGAGCCCAAGTTCAGGCCTCAGATGCTTGATATTTTATCTACTTTAGAAAGGCTTCAGGAATCAAAGAAGCATGTTGTAACACCC 1143 0.385 MGNCIRESSDITTPYPNNPIGATKGGYYRKRSTLLLPPPPIQHVDDDDYGKDDEIVLATSRSEGDILLISSPHLKSFTFNNLKNVTGNFDHENLIGEGGFGYVYKGWINAHSFDPTFGIGTVVVAVKKLKPQGFQGHKEWLSEVNHLGQLHHPNLVRLIGYCFEGDNRLLVYEYMPKGSLENHLFHKGNETLPWTTRMKVAIDAARGLTFLHESEQQVIYRDFKTSNILLDLEFNAKLSDFGLAKAGPIGDRSHVSTQVLGTVGYAAPEYILTGRLTTKCDVYSFGVVLLELLTGRRAIEVTKSGMEHNLVEWAKPYLGDRRKLFRIMDTKLAGQYSQRAAYIVALLALQCISEPKFRPQMLDILSTLERLQESKKHVVTP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1880 381 Gene3D Transferase(Phosphotransferase) domain 1 175 380 - -
Ahy11g1880 381 PANTHER OS01G0588500 PROTEIN-RELATED 55 373 - -
Ahy11g1880 381 ProSitePatterns Protein kinases ATP-binding region signature. 95 128 IPR017441 GO:0005524
Ahy11g1880 381 Pfam Protein tyrosine and serine/threonine kinase 92 310 IPR001245 GO:0004672|GO:0006468
Ahy11g1880 381 PANTHER BNAC02G17010D PROTEIN 55 373 - -
Ahy11g1880 381 CDD STKc_IRAK 95 371 - -
Ahy11g1880 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Ahy11g1880 381 ProSiteProfiles Protein kinase domain profile. 89 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy11g1880 381 SUPERFAMILY Protein kinase-like (PK-like) 65 369 IPR011009 -
Ahy11g1880 381 Gene3D Phosphorylase Kinase; domain 1 62 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1880 Ahy-Chr11 122796581 122804564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1880 75 368 Glycoside Hydrolase AT3G07070 51.007 5.70e-97 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Ahy11g1880 PK_Tyr_Ser-Thr 5.00E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1880 - - gmx:100791844 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1880 11 122796581 122804564 Ahy11g1880 11 122796581 122804564 ECH
Ahy11g1880 11 122796581 122804564 Ahy1g2982 1 111611243 111613958 hybridization
Ahy15g1668 15 38447445 38450214 Ahy11g1880 11 122796581 122804564 PCT