Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1876 ATGGGGAAGTCACCAGGAAAATGGATCAAAACTGTATTGTTTGGGAAGAAGTCATCGAAATCAAATATTTCAAAAGGAAGAGAGAAGCTTGTTAATCAAAAGGAAGGAGTGGTGACTTCCAAGGTATCAGAAACTGATTTGTCTTTAGATCCAACCCCCAATACCGTGGCCAAAAATGAGGAAGAGCTGGTGCTGGAGAATAATGAGTCAGAAACTGTTTTAAATGAAAATCAAGAAATAAACACAGTGGGATCTGTTCTCCAAGATTCACCACCTGATCCAGAGAAAATAAAGCTGGAGGAAGCAGCAACAAAGGCACAGGCTGCTTTCAGGGGTTACTTGGCACGAAGGGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACCTTGTTAGGAGACAAGCTGTGGCTACATTATGCTGTATGTATGGCATTGTCAAGTTACAAGCACTTGTTCGTGGCAGAAGAGTCAGACAGTCTGTTGTTGGGTTTGAAATCCAAGAGAAGTCTCCGGATGGCAAACCTGTCAAGCCAATTGCTGTACCTGCAAAAATTACAAATCTGTCAGCCAATGCTTTCATCCGAAAGCGTCTTGCTTCATCAACTACTATAATGGCCCTGCATTTGCAATATGTTCCTGGAGATCCAAATTCAGTTCTAAGCTGGTTGGAGCGCTGGTCAGCAACTAACTTTTGGAAACCAGTCCCCCAACCAAAGAAAATTCGAGACACTAAGCACCAGAGAAAGCAGGGTACTATTTCAGTGGGAGAAGCTCCATTGAGCAAGTCAAGACGTACCACCCGGAAGGTTCCTGCTGCAAGTTTTGACCCTGCCCCAGTGCAAGCAAATCCTGAACTTGAGAAGCCAAAACGAAGCTTGAGGAAAATTTCAAGCCAGCCCTCAGATACTCTGCAGGAAAACCCACAAAGTGAGCTTGAAAAGGTAAAGCGTAACTTGAGAAAGGTTCACAACCCAGTTGTTGAGAATGCTGTTGTCCCAGAAGTAGAACCCGAGGCCCCAAAGCAACATTTGGAAAAGGGGGCATTTACCCCAGTGCATGGTGTTTCGGAACAAGGGATAACTAGTTCTGATGAGAAGAATAACAAAGAACCAACTTTAACCATTTCCAATGTGCCCGATGCAGAACCTGCTATAAATTATATTAGTAAGGAGGTGTCTGATATGCCAAGCCATTATCAAGTGGTTGTGCAACCAAAGCCTTTGACCGAGATTATAAGTAAAGATGAAAACATTGCTGAAGATGAAGTGAAAACAGAGCCAAAAGATTTACCAGAGACTAGTTGCAAGGTTGAAAATTCTCACATAACAAATGGAGATTTGAGTCACAAGGAAGATCCTGTGGGAACTGAAAACCAGAAGCCGAACAGAAAGGCCTCAAATGTAGTGAAGCAAGAGCGTGCTGAGAATGGTTTACAGAACAGTCCAACTTTACCAAGTTACATGGCAGCAACTGAATCTGCCAAGGCAAAGTTGAGGGCTCAAGGATCCCCACGATTAGGACACGATGGAAGTGAGAGAAACAATGTTGCTCGGAGACATTCTCTGCCATCTTCAACTAACACCAAAATTAGCTCACAGTCACCTAGGACACAGAGACCAGTCCAATCAGGTGGCAAAGGAAGCAACAAACCTGTACCTTCTAGAGACGGCAATGGAAAGGTAATTCAAGCAGAATGGAGGAGGTGA 1725 0.4394 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNQKEGVVTSKVSETDLSLDPTPNTVAKNEEELVLENNESETVLNENQEINTVGSVLQDSPPDPEKIKLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCCMYGIVKLQALVRGRRVRQSVVGFEIQEKSPDGKPVKPIAVPAKITNLSANAFIRKRLASSTTIMALHLQYVPGDPNSVLSWLERWSATNFWKPVPQPKKIRDTKHQRKQGTISVGEAPLSKSRRTTRKVPAASFDPAPVQANPELEKPKRSLRKISSQPSDTLQENPQSELEKVKRNLRKVHNPVVENAVVPEVEPEAPKQHLEKGAFTPVHGVSEQGITSSDEKNNKEPTLTISNVPDAEPAINYISKEVSDMPSHYQVVVQPKPLTEIISKDENIAEDEVKTEPKDLPETSCKVENSHITNGDLSHKEDPVGTENQKPNRKASNVVKQERAENGLQNSPTLPSYMAATESAKAKLRAQGSPRLGHDGSERNNVARRHSLPSSTNTKISSQSPRTQRPVQSGGKGSNKPVPSRDGNGKVIQAEWRR* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1876 574 MobiDBLite consensus disorder prediction 418 574 - -
Ahy11g1876 574 Gene3D - 97 146 - -
Ahy11g1876 574 PANTHER PROTEIN IQ-DOMAIN 31 1 557 - -
Ahy11g1876 574 MobiDBLite consensus disorder prediction 478 494 - -
Ahy11g1876 574 MobiDBLite consensus disorder prediction 361 381 - -
Ahy11g1876 574 MobiDBLite consensus disorder prediction 343 384 - -
Ahy11g1876 574 ProSiteProfiles IQ motif profile. 148 176 IPR000048 GO:0005515
Ahy11g1876 574 MobiDBLite consensus disorder prediction 523 555 - -
Ahy11g1876 574 MobiDBLite consensus disorder prediction 419 441 - -
Ahy11g1876 574 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Ahy11g1876 574 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Ahy11g1876 574 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Ahy11g1876 574 PANTHER IQ-DOMAIN 5-RELATED 1 557 - -
Ahy11g1876 574 SMART iq_5 98 120 IPR000048 GO:0005515
Ahy11g1876 574 SMART iq_5 121 142 IPR000048 GO:0005515
Ahy11g1876 574 MobiDBLite consensus disorder prediction 241 317 - -
Ahy11g1876 574 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Ahy11g1876 574 MobiDBLite consensus disorder prediction 449 464 - -
Ahy11g1876 574 Pfam Protein of unknown function (DUF4005) 478 556 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1876 Ahy-Chr11 122391018 122396716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1876 1 574 IQD Protein Family AT1G74690 44.499 1.94e-124 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1876 - - ahf:112710449 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3802 13 137190829 137193671 Ahy11g1876 11 122391018 122396716 ECH
Ahy11g1876 11 122391018 122396716 Ahy11g1876 11 122391018 122396716 ECH
Ahy11g1876 11 122391018 122396716 Ahy1g2985 1 111652644 111658362 hybridization