Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1866 ATGTTCAAGATCGTTGCCAGCAGAGCGAGGGCTTCAACTCCACATGCCCGCAACGCTATCCTTTCTTACAATGTCTCTCGGTCTGGTCATGCTTTATCATCCGCCACAGTAGAAGCCGAAGAGATATCAGGTTCTAGACCTGCTGAAGTTTTGAACTTGGTTCAGGGTAAATGGGTCGGAGCTTCAAAGTGGAACACAATTGTGGACCCGCTAAATGGAGACCCCTTTATTAAAGTTGGTGAAGTTGATGAAACAGGCCTTCAGCCCTTTGTGGAAAGTTTGGCCAGCTGCCCCAAGCATGGTCTGCACAATCCATTTAAGGCTCCGGAGAGATATCTTATGTTTGGAGATATATCTGCTAAGGCAGCTCACATGCTATCACTCCCTAAGGTTTCAGATTTCTTTGCAAGGCTAATACAGAGAGTTTCTCCCAAGAGTTATCATCAGGCCTGTGCAGAAGTTTATGTGACACAAAAGTTTCTAGAGAATTTCTGCGGTGATCAGGTTCGCTTCCTGGCAAGGTCTTTTGGGGTGCCTGGAAATCATCTTGGGCAGCAAAGTCACGGTTTCCGTTGGCCATATGGTCCGGTAAGCATTGTCATGGAGCAAATGTTGCGTCTGCTTCACACATGTGGTTTACCTGTAGAAGACGTAGACTTCATAAATTGTGACGGGAAGACAATGAACAAGCTGTTGCAGGAGGCAAATCCAAGAATGACCCTTTTCACTGGTAGTTCAAGAGTGGCAGAGAAATTGGCTGTTGATTTGAAGGGCCGGATTAAATTGGAAGATGCTGGATTTGATTGGAAAATACTGGGCCCTGATGTTGACCAGGAAGATTATGTTGCATGGGTCTGTGACCAGGATGCTTATGCATGCAGTGGTCAGAAGTGCTCAGCACAATCATTATTATTTATGCATGAGAACTGGGCTTCTACTTCCTTGGTATCCAAATTGAAAGGTCTTGCTGAGAGAAGAAAGCTAGAGGACTTGACAATTGGTCCAGTTCTCACTTTTACAACTGAATCAATGATGGATCACATGAAACAATTACTTGAGATACCAGGTTCAAAGCTGCTCTTTGGGGGCAAGCCTTTAGAGGGTCATTCTATTCCACCTATTTACGGTGCTATTAAGCCCACTGCTATTTATGTTCCCCTTGAGGAAATTGTGAAGGACAAGAATTATGAGCTTGTGACAAAAGAAATTTTTGGACCTTTCCAGATAATTACTGACTACAAAAGCAGTCAACTACCAACCGTGTTGGATACATTGGAAAAAATGCATGCACATTTAACTGCTGCTGTAGTTTCAAATGATCCTCTCTTTTTACAGGAAGTCATTGGTAGATCAGTGAATGGTACAACTTATGCTGGTCTAAGAGCAAGGACTACTGGAGCTCCACAAAACCATTGGTTTGGACCTTCTGGAGATCCTAGGGGTGCTGGAATCGGAACACCAGAAGCTATAAAACTAGTATGGTCTTGCCACAGAGAAGTTATATATGATTATGGTCCAGTACCAAACCGTTGGGAAATTCCTCCATCAACATGA 1554 0.4382 MFKIVASRARASTPHARNAILSYNVSRSGHALSSATVEAEEISGSRPAEVLNLVQGKWVGASKWNTIVDPLNGDPFIKVGEVDETGLQPFVESLASCPKHGLHNPFKAPERYLMFGDISAKAAHMLSLPKVSDFFARLIQRVSPKSYHQACAEVYVTQKFLENFCGDQVRFLARSFGVPGNHLGQQSHGFRWPYGPVSIVMEQMLRLLHTCGLPVEDVDFINCDGKTMNKLLQEANPRMTLFTGSSRVAEKLAVDLKGRIKLEDAGFDWKILGPDVDQEDYVAWVCDQDAYACSGQKCSAQSLLFMHENWASTSLVSKLKGLAERRKLEDLTIGPVLTFTTESMMDHMKQLLEIPGSKLLFGGKPLEGHSIPPIYGAIKPTAIYVPLEEIVKDKNYELVTKEIFGPFQIITDYKSSQLPTVLDTLEKMHAHLTAAVVSNDPLFLQEVIGRSVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTPEAIKLVWSCHREVIYDYGPVPNRWEIPPST* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1866 517 Pfam Aldehyde dehydrogenase family 198 459 IPR015590 GO:0016491
Ahy11g1866 517 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 43 200 IPR016162 GO:0016491
Ahy11g1866 517 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Ahy11g1866 517 PANTHER ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED 197 516 - -
Ahy11g1866 517 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 197 516 IPR044638 GO:0004029
Ahy11g1866 517 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 18 199 IPR044638 GO:0004029
Ahy11g1866 517 PANTHER ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED 18 199 - -
Ahy11g1866 517 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 266 458 IPR016163 GO:0016620
Ahy11g1866 517 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 201 265 IPR016162 GO:0016491
Ahy11g1866 517 SUPERFAMILY ALDH-like 52 483 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1866 Ahy-Chr11 121442283 121449041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1866 1 517 Aldehyde Dehydrogenase Gene Family AT5G62530 73.201 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1866 K00294 - gmx:100806579 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1866 11 121442283 121449041 Ahy11g1866 11 121442283 121449041 ECH
Ahy11g1866 11 121442283 121449041 Ahy1g2989 1 111707918 111714684 hybridization