Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1833 ATGGGACACAAGAAGCGAAATTCGGCTCCGCGGTCCAAACATTCGCCGGCGACTTCTCCGGCGGCGCAATTCGCCGTCGTCGGCGACGGTACCGCATCGCCGGAGAAACAAGACTCAGGCAATGTTCCCGATCACAACAGCAAAACCAATAACGGCGTTCAGAACCCTAACGGGATCGAGTTTCCTCCTCCGCCACCGCCGCCGCCTCCTCCGCCTCAATCCGATGGTCCTTCCTCCGATTACACCGCGATCAAGCTCGAGTGTGAGCGTGCCCTAACGGCGTTCCGGCGCGGGAACCACAACAGAGCACTGAAGCTCATGAAGGAGCTATGCGGGAAGCAAGAGAACGCTGCTCACTCCGCATTCGCGCACCGCGTCCAGGGATTCGTCGCCTTTAAGGTCGCCGGAATCTTGAACGACCCTACCGCGAAGCAACGGCACGTGAAGAACGCCGTCGATTCGGCTCGCAAGGCCGTCGAGCTGTGCCCTAATTCGGTCGAGTACGCGCACTTCTACGCCAATTTGATGCTCGAGGTCGCGAACGACGGGAAGGATTATGAGGAGGTAGTACAGGAGTGCGAGAGGGCGCTGGCGATAGAGAACCCTAGCGATCCAGGGAAGGAGAGCTTCCAGGATGAGAGTGATCAGAAGTTGTCGACTCCCGAGGCACGTGTTTCGCATGTGCAAAACGAGCTGCGGCAGCTGATTCAGAAGTCGAACATCGCTTCGCTGTCGAGCTGGGTGAAGAATCTGAGCAACGGCGAGGAGAGATTTCGGCTGATTCCGATTCGGAGGCCGACGGAGGACCCTATGGAGCTGAGACTGGTTCAGACTCGAAGGCCTAACGAGATCAAGAAAGTGACGAAGACGCCGGAAGAGAGGAGGAAGGAGATTGAAGTGAGAGTCGCCGCTGCGAGGCTGTTGCAGCAGAAGTCTGAGTCGCCCCAATCTCCGAACGAAGTAGATAAGGATGAGAGGGGGTTGGATTCATCCTCAGCGGCTGGTCAGAGTAGGAGGAGGCATGGGAATTCGAAGAAGAATGGGTCTACTGCGGAGAGGAGGAAATGGGTGCAATCTTACTGGAGTTCGATGAGTGTGGAAATGAAGAAGGACATGCTTAGGGTTAGGGTTTCTGATCTTAGGTCACACTTTGGGTCTTCGAAGGATACTTTGCCTATTGATCTTTTGGCGGAGGCTGTGTCGTATGCTGAGGCCAATAAGACATGGAAATTCTGGGTTTGCTGCCATTGTGATGAGAAATTTAACGATGACGAGTCTCACAGCCAACATCTTGCGCAGGCGCACATGGGTATGCTCTCGCCGAATTTGCAGGGGCATCTGCCCCATAATGTTGACAGTGAGTGGATTGATATGATTCATAATTGTTCTTGGAAGCCGCTGGATGTTTCTGCTGCAGTTAAAATGCTTGAGAGTAGAATGAAATTCAAAGGTTCATCATTAGTTGAGGATTCGTACTTCGATCATCATACACAGGACTACTATGACTGTATTAACGATGCAACTGATCCTTACCATGAGAAAGAAGGTTTGGAATACAGTCTTCATAACTGTACAACAGAAAGCAATAACTATTGTAAAGCTGTTGCAAGTAATGTGAGAGAAGGCGTTGAAAACCAATTATCTATGTCACATCCTTTCGCTGACAGTTGGCCAGTATCTGATGATTCTGAGCGCGCAAAACTTCTGGAGAAAATTCATGCAGTATTTGAGATGCTTATTAAGCATAAATATCTTGCTGCTAGTCACCTTAGCAAGGTTATACAATTTACTATGGGTGAGATTCAGGGTCTTGCTGCTGGTTCTCAATTTCTAAATCATGGTGTCGATCAAACGCCAATGTGCATATGCTTTCTGGGGGCTTCACAGCTTAAGAAAATTCTCCAATTTCTTCAAGAGCTATCTCATGCATGCGGATTGGGTAGATATGGTGATAAAGGTAATGGTCTCATGAATGAGTTTCATGATATCAATCAAGGTCCTGAGATCAAAGAGAATATTGTTCTCAATGGAGATGCATCATGCCTCCTTCTGGATGAGTGTTTACTGGTGACACAAGTCACATTTGATGCTGCTCAGGGGACTGTATTGGATAATATGACTGCCCAAAGTTCTCATGATGGTATTTCAAGCGATAATGATGATTTTCTATCCTGGATATATTCAGGTTCAGCTATAGGGGATCAATTGACATCATGGATGCGAACCAAAGAAGATAATAAACACCAAGGAACAGAAATTATCAAGATGCTTGATAAGGAGTTTTATCAACTACAGACCCTATGTGAGAAGAAGTCTGACCGAATGAGTTATGAAGAAGCACTGCAGACAGTAGAGGATCTTTGTCTTGAAGAGGGAAAGAAGAGGGAAATTGTTGGTGACTTTGTCCAGCAAAGCTATGAGTCTGTCTTAAGAAAACGAAGAGAAGAGCTCATTGAAAGTGAGAATGATGTGATGAATGTCGGCAATAGGTTTGAGTTGGATGCCATATCAAATGTTTTGCAAGAAGCAGAATCAATGAATGTTAATCAATTTGGATATGAAGAAACTTATGCTGGTGTAACTGCTCAGTTATGTGACTTGGAATCTGGTGAAGAAGAAGAATGGAGAATGAAAGACTACTTGCATCAAATGGATGGTTGTATAGAAATTGCTATTCAGAAACTGAAAGAGCACTTGTCTATAGAGCTTAGCAAAATTGATGCTCGAATCATTAGAAATATTGCTGAGATGCAACAATTGGAACTCAAGCTTGGGCCTCTTTCCGCTTATGATTATCGGGCTATATTATTGCCTCTAGTGAAGTCATACCTAAGGGCACGTTTAGAAGAATTTGCTGAGAAGGATGCAGTAGAGAAGTCTGATGCTGCGAGGGAAGCATTCTTGGCTGAACTTGCACGTGATGCTAAGAAGGCTAAAGGGGGAAGTGAGAACACAAGAAATGTGGATAAGACCAAAGATAAGAAGAAGACTAAAGATCACAGAAAAACAAAAGATCTGAAGGCTTCAAGTGGTCATGAGGAGCTATCGCTGCAAGCTAGCAGTCCTGATTCCAATACTGTTGCACCTGATAGTTACTTTCAAGATCCTGAGCTTGTTTCCATGAATGATAATTACTTGGAACAACAGGAAGAGGAATATAGACGGAAAATAGAGCTAGAAGAGGAGGAAAAAAAGCTTGAGGAAACTTTAGAATTTCAGCGTAGGATAGAAAATGAAGCCAAACAAAAACACCTTGCTGAATTACAAAAGAAATCATCCGGGATATGTTTAGAGGAAGTGGCGGACAAAATTCAGGATGCTCAGTTGAAGACAGTTGCTGATGGGACAGATGTGCATGATCATGTAAAACTGCCTATACAGTCAGCTGATGAGAATTGCTGTCCTAGTGATGTGGATAGTGTGATAGTAACCACTAAAAATGGTTCTTTGGTGCCAAATAAATATTCAGTTGATTCAGCTGATCAAAAGATATTGCATCAGCCAACCGTTAAACAAGCAGGTATACCTAATGGAGTTGTTCCAGAGAATGGTCATCAGTTGCCTGATCGTCGTCCAGGGAAAAAGCATAAACGGCATAGGAATTCTTCCAAAATGGTTGATGGAAAATTGGAATCTGTCTCATTGGAAAAGAATATTGAGGATGCACATACTGACAGACATTCAAGAGAGCATGTTAAATTCCATAATGATCAAGATGCAAACAATGGGTGGGAAAGCAATGTATCAAAGGCGAAGAAAGATCTTCAAATGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAAAAGCTGTACGACAAAGCCTGGACACATATCAAGCACGTGGAAAACTGCCTTTGGATTCTAGTTTAAGAATGTCTCAGAGATCTGCTTCACAAGTAGATTCATTGGGTTTTCCAACAGAGAAAGACTCAACTGAGGATGCAAATGGAACTACATTGCTTGGTACTGGGCTAAAGAATGAAGTTGGTGAATATAACTGTTTTCTCAATGTTATTATACAGTCTTTATGGCATTTAAGACGCTTTCGGGAGGAATTTCTTGGCAGATCAAGATCAGAGCATGATCACGTTGGCAATCCTTGTGTTGTCTGTGCATTGTATGAGATCTTCACTGCTTTGGACCTTGCATCAAAGGACTCAAGGAGAGAAGCAGTAGCACCTACTTCCCTGCGAATAGCTCTAAGCAACCTATATCCAGATAGTAACTTCTTCCAGGAGGCTCAGATGAACGATGCTTCTGAGGTACTTGCAGTGATATTTGACTGCCTTCATCGTTCATTTACCCGTGGTTCAAGTGTTTCTGACACCGAGTCAGTGGAAAGTAATTGCATGGGATCTTGGGATTGTGCAAATAATACTTGTATAGCACATTCACTTTTCGGAATGGACATTTTTGAGCAAATGAACTGCTATCACTGTGGTCTCGAATCCAGACATTTGAAGTATACTTCCTTCTTTCACAATATAAATGCCAACGCATTACGAACAATGAAGGTTATGTGTTCTGAAAGTTCCTTTGATGAGCTATTGAACCTTGTGGAGATGAACCATCAATTGGCTTGTGATCCAGAAGTTGGTGGTTGTGGCAAGCTTAACTACATCCATCACTTTCTTTCAACTCCACCTCATGTTTTTATGACAGTTCTTGGTTGGCAAAATACATGCGAGAGTGCTGATGATATAACAGCCACTGTGGCAGCCCTGAGCACTGCACTAGACATCAGTGTCCTATATCGAGGCTTAGATCCTAAAAGAACCCATAGCTTGGTATCAGTGGTTTGCTACTATGGCCAACATTATCATTGCTTTGCTTACAGTCATGACCATGATCAATGGATTATGTATGATGACAAGACTGTCAAGATAATTGGTGGATGGGCAGATGTTCTTACAATGTGTGAAAAAGGGCATCTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAACTAG 4977 0.4412 MGHKKRNSAPRSKHSPATSPAAQFAVVGDGTASPEKQDSGNVPDHNSKTNNGVQNPNGIEFPPPPPPPPPPPQSDGPSSDYTAIKLECERALTAFRRGNHNRALKLMKELCGKQENAAHSAFAHRVQGFVAFKVAGILNDPTAKQRHVKNAVDSARKAVELCPNSVEYAHFYANLMLEVANDGKDYEEVVQECERALAIENPSDPGKESFQDESDQKLSTPEARVSHVQNELRQLIQKSNIASLSSWVKNLSNGEERFRLIPIRRPTEDPMELRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSPNEVDKDERGLDSSSAAGQSRRRHGNSKKNGSTAERRKWVQSYWSSMSVEMKKDMLRVRVSDLRSHFGSSKDTLPIDLLAEAVSYAEANKTWKFWVCCHCDEKFNDDESHSQHLAQAHMGMLSPNLQGHLPHNVDSEWIDMIHNCSWKPLDVSAAVKMLESRMKFKGSSLVEDSYFDHHTQDYYDCINDATDPYHEKEGLEYSLHNCTTESNNYCKAVASNVREGVENQLSMSHPFADSWPVSDDSERAKLLEKIHAVFEMLIKHKYLAASHLSKVIQFTMGEIQGLAAGSQFLNHGVDQTPMCICFLGASQLKKILQFLQELSHACGLGRYGDKGNGLMNEFHDINQGPEIKENIVLNGDASCLLLDECLLVTQVTFDAAQGTVLDNMTAQSSHDGISSDNDDFLSWIYSGSAIGDQLTSWMRTKEDNKHQGTEIIKMLDKEFYQLQTLCEKKSDRMSYEEALQTVEDLCLEEGKKREIVGDFVQQSYESVLRKRREELIESENDVMNVGNRFELDAISNVLQEAESMNVNQFGYEETYAGVTAQLCDLESGEEEEWRMKDYLHQMDGCIEIAIQKLKEHLSIELSKIDARIIRNIAEMQQLELKLGPLSAYDYRAILLPLVKSYLRARLEEFAEKDAVEKSDAAREAFLAELARDAKKAKGGSENTRNVDKTKDKKKTKDHRKTKDLKASSGHEELSLQASSPDSNTVAPDSYFQDPELVSMNDNYLEQQEEEYRRKIELEEEEKKLEETLEFQRRIENEAKQKHLAELQKKSSGICLEEVADKIQDAQLKTVADGTDVHDHVKLPIQSADENCCPSDVDSVIVTTKNGSLVPNKYSVDSADQKILHQPTVKQAGIPNGVVPENGHQLPDRRPGKKHKRHRNSSKMVDGKLESVSLEKNIEDAHTDRHSREHVKFHNDQDANNGWESNVSKAKKDLQMEDEEEERFQADLKKAVRQSLDTYQARGKLPLDSSLRMSQRSASQVDSLGFPTEKDSTEDANGTTLLGTGLKNEVGEYNCFLNVIIQSLWHLRRFREEFLGRSRSEHDHVGNPCVVCALYEIFTALDLASKDSRREAVAPTSLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTRGSSVSDTESVESNCMGSWDCANNTCIAHSLFGMDIFEQMNCYHCGLESRHLKYTSFFHNINANALRTMKVMCSESSFDELLNLVEMNHQLACDPEVGGCGKLNYIHHFLSTPPHVFMTVLGWQNTCESADDITATVAALSTALDISVLYRGLDPKRTHSLVSVVCYYGQHYHCFAYSHDHDQWIMYDDKTVKIIGGWADVLTMCEKGHLQPQVLFFEAVN* 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 1173 1203 - -
Ahy11g1833 1658 CDD Peptidase_C19 1416 1655 - -
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 307 353 - -
Ahy11g1833 1658 Gene3D Tetratricopeptide repeat domain 80 212 IPR011990 GO:0005515
Ahy11g1833 1658 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1325 1657 IPR028889 -
Ahy11g1833 1658 SUPERFAMILY Cysteine proteinases 1325 1655 IPR038765 -
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 1013 1030 - -
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 1291 1318 - -
Ahy11g1833 1658 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1658 - -
Ahy11g1833 1658 Pfam Protein of unknown function (DUF629) 357 889 IPR006865 -
Ahy11g1833 1658 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1658 - -
Ahy11g1833 1658 Coils Coil 1042 1083 - -
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 206 220 - -
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 1 80 - -
Ahy11g1833 1658 ProSitePatterns Zinc finger C2H2 type domain signature. 414 435 IPR013087 -
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 34 57 - -
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 58 76 - -
Ahy11g1833 1658 Pfam Protein of unknown function (DUF627) 90 201 IPR006866 -
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 975 994 - -
Ahy11g1833 1658 Gene3D Cysteine proteinases 1306 1656 - -
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 1288 1318 - -
Ahy11g1833 1658 Pfam Ubiquitin carboxyl-terminal hydrolase 1326 1633 IPR001394 GO:0004843|GO:0016579
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 975 1030 - -
Ahy11g1833 1658 MobiDBLite consensus disorder prediction 200 221 - -
Ahy11g1833 1658 Coils Coil 1255 1275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1833 Ahy-Chr11 118686512 118696403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1833 80 1655 C2H2 Transcription Factor Family AT3G47890 56.650 0.0 1706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1833 - - adu:107493676 3237.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1833 11 118686512 118696403 Ahy11g1833 11 118686512 118696403 ECH
Ahy11g1833 11 118686512 118696403 Ahy1g3009 1 112181289 112191196 hybridization