Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1832 ATGACCCTTAAGGGTGGAACCACACAGGCCTGCGCTGCATGCAAATTTCAGAGAAGAAAGTGCACTCCTGAGTGTCTTCTTGCACCATACTTCCCTGCAGACCAACCAAAAGTGTTCCTTAATGTCCACAAGCTATTTGGGGTGAGCAACATTGTGAAAATATTAAAGGACGTGGATCCTAGTCAGAAGAAGAATGCTATGGAGTCCATCATCGTTCAAGCTAGTTATCGCGATAAGTACCCGGTTCGTGGTTGCGTGGAAGAAATTTGCAGGCTGCAAAACCAAATTTGGCTGCACGAAGAAGAGCTTCATGCTGTGTATCAGCAGCTTGAGATGTGCAGGCAACACCAACAGCAGCAGCACCAAGGGATTCATCACGTTGTTCCTGATGATCTTGCATCACAGTTAGAGTTGGGAATGGCGCCACGCGCTGCCAACAATGCTCTTCCGCTGTTTAATCACGCGCCACAGCCCCAGCAGCAGCAGCAGCAACAGGTTTACAATACTTCTGTGGCTGCTTTGCCTGTGTCACAGCAACATTCATATTCCAACAGCAACAGTGTGGATTATAACTCCCTTTACATTGAATCCAAGGAAAACAACAATAATGGAACAAATCCTTTGTGGGTACCTTATGCAAATAACAATGGAAGTCCCATAGCAATGCAGTCTCAGATGGTTACCTCACAGGCACTATCCATGCAGCAAGAAGCTGCTGGGGATTATGATGAGATGCATCCATTTTTCGAAACAATTGATGATAGGCAATCATATATTTATTCCAAGGAGGCTTATGAATCAAGCTCAGAAGAATCATTGAAAGATTCAAGAAAGTGCACCGAGCACGTTGCTGAGAATGAATTGAAGAGTGCTGCCGCATGCTTCAGCCTTACCAGTGTCAACTGA 906 0.4547 MTLKGGTTQACAACKFQRRKCTPECLLAPYFPADQPKVFLNVHKLFGVSNIVKILKDVDPSQKKNAMESIIVQASYRDKYPVRGCVEEICRLQNQIWLHEEELHAVYQQLEMCRQHQQQQHQGIHHVVPDDLASQLELGMAPRAANNALPLFNHAPQPQQQQQQQVYNTSVAALPVSQQHSYSNSNSVDYNSLYIESKENNNNGTNPLWVPYANNNGSPIAMQSQMVTSQALSMQQEAAGDYDEMHPFFETIDDRQSYIYSKEAYESSSEESLKDSRKCTEHVAENELKSAAACFSLTSVN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1832 301 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Ahy11g1832 301 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 277 - -
Ahy11g1832 301 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 277 - -
Ahy11g1832 301 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1832 Ahy-Chr11 118583413 118585030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1832 1 264 AS2 family AT3G47870 40.594 1.39e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy11g1832 LOB 3.50E-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1832 - - lang:109357116 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1832 11 118583413 118585030 Ahy20g2502 20 132334268 132338021 ECH
Ahy11g1832 11 118583413 118585030 Ahy11g1832 11 118583413 118585030 ECH
Ahy11g1832 11 118583413 118585030 Ahy1g3010 1 112196771 112198058 hybridization