Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1827 ATGTTCCAGGGATCTCCCCCTCCTCCGGCTACCGCCCAACGCCGATCCTCGTCGTCGCCGGAACGCAATTCCCTAAACCACATCGCCGGCGACGATCACGCCGCCGCCGCCGCCGCTCCCGATCCTCCTCCTCCGCAAACCACAAGGAGCAACCGCCCCTCTCGCGCGTGCGTCCTCCGCGCCGCTTCTCGCCTCTCAGGTCTCTTCGCCGCGGAGCCTTCACCGTCGATCCATCGGCGGAAGCCGAAGTCCGGGAAGAAAGAGCGCCGGCGGGCGGAGGAGGAGGAGGAGGAAGAAGAAGATGAGGAGTCGCCGCCGCTGTCGCCACAGCAGCAGCAATGCGCGAAGATCGTGACGCAGCTCGTGGAACCGCCGCTGTCGCCGTCGAGGATGCCGCGGTGGAACCTCCGGTGCATGTGGGAGTTGGCTTCGGTGCTCAATTTTTTGCATCTGTTTAGGCCACTTTTGAATATCTCACTTGAATTTTCTGCTGAAGAGTTCGAGACTGCACTTCTTACTCCCAATGACACTTTGAGTGATATACATATGCCTTTGCTTAAGGCAATCCCTCCTATTATACGCATGGCACTCACACGTGATACTTGGATAACTGTATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTTGCTGATGGGGATCTTCCAATTGTTGCTTCACATGGGACGGAAATTGAAGTATATAAATCGCTTGATCCAGGGGTTCGTCTTGTGATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGGAATTATATTGACAACTCCCTCAAACATGGTGTTAAACTCTCAACATTTCGTAAAGAGCGAATTGGAGGTGATTCACATGGAATTTCTTATTGGTATGAAGATGACCCAGTTGTTGGTCATAGGCTGTATCGAGAAACAAGAAAAACTGAAGTGATTCAAATGAAGAAAGGGAAACCAAGAGGTTCACTGGTTCTTTCTAATACATCATACCAGTGGGAATCTGTAGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTTTCTCAAGTAAAAACAGGACAGAGATCTCTGTGGGGAAAAAGCTAAAGATAGACATGCTTCCTGAAATTGAGAAAGTCCATAAGAGAAAGGAAAAGTTGCTGAAAAAGCAACAGAGAGAGGCCCTTCTTCTTGATAATTACATGATTGCTGATGGTCTTGCTACCGGACGTTCACTGCGTTATAGGAAGCCTGTTACCTACACTTTCGATGATTATGATAAGTCCATAAATGAGGCAATCAAAGAAACCAAACGGAAACAACCATCCCCAGAATCCATGCCCAAGAGAGAGTTGGTAGCAAAACCGGAAGCTTTTAGTAATGGTAAATGGAGTGGTCCTTCACATTCCCCTCAAAATCTGGATTTTGGTTGGTCATCTCCAAAATCACCTTACTCTGATGATGATGAGGAAGACCATATAACGGATCCACTTGATCGAACAAATCGTCGAAGACAGAGACCGAAGCGGTATTCAGATAAAGAGTTCCTTGATCCTGTATCAGATAATGATGCTGACTTTGACAGTGATGATGATATTGTTGGAGAAGCTGTATATGATGAAGAGTATCTCAAGAAGCGTAAGCAGAGAAGGAAGCTTTCTAGTAGCTCCGAAGGAGATGAAGAATATCAGTGGGATGAAGATAATGTTGAAGAGGAAGAAGAGGAAGAGGAAGAGGAAGAAGAAGAAGATGATGATGACGATGAAGATTCCTTGAGTATCAGCGAGGACAGTGACAAACCCCGTAAGTTCAAGGCATTGCGAGGCCGTACTACGAGGGATTCTAAACGCAGGCCTGTCAATGATTTTCAATCAGGTCTAAGGCGCAGTAAGAGGTCAACCCGAAACCGTGTAAATTACCGACAATACGAGGCGTCTGAATCAGAACAAGAGTTTATTAAACCTGAAAAGTCTAATACATCAGCTGATCACTCAGATCCCAGTGAGAATGGGGAATATATGATGGAAAGTGAAGATTCCGACCGGAATGATGATGAAGACCAGGAAATGAAAGTAGAAGAGCAGCCTGCTACTTATCCCATAGTAGAAGAGAATGAACAAAATGCACCTCCCGAAAAGTCAAGTAGTCCTGGTCAGGAGGAAGTTGAGAGCATCGGAAAGCACCATTTCCTTGATTTGAACGAGCTCGCCCCTAGCTCGGGTTTCGATGATGGTCCAAATACAATAATGAAAGATGAAGACAATGAATGA 2259 0.4626 MFQGSPPPPATAQRRSSSSPERNSLNHIAGDDHAAAAAAPDPPPPQTTRSNRPSRACVLRAASRLSGLFAAEPSPSIHRRKPKSGKKERRRAEEEEEEEEDEESPPLSPQQQQCAKIVTQLVEPPLSPSRMPRWNLRCMWELASVLNFLHLFRPLLNISLEFSAEEFETALLTPNDTLSDIHMPLLKAIPPIIRMALTRDTWITVLCRKLRDWWHWVADGDLPIVASHGTEIEVYKSLDPGVRLVILKALCDIRVEQEDIRNYIDNSLKHGVKLSTFRKERIGGDSHGISYWYEDDPVVGHRLYRETRKTEVIQMKKGKPRGSLVLSNTSYQWESVATNFDEFQDVSEKLFSSKNRTEISVGKKLKIDMLPEIEKVHKRKEKLLKKQQREALLLDNYMIADGLATGRSLRYRKPVTYTFDDYDKSINEAIKETKRKQPSPESMPKRELVAKPEAFSNGKWSGPSHSPQNLDFGWSSPKSPYSDDDEEDHITDPLDRTNRRRQRPKRYSDKEFLDPVSDNDADFDSDDDIVGEAVYDEEYLKKRKQRRKLSSSSEGDEEYQWDEDNVEEEEEEEEEEEEEDDDDDEDSLSISEDSDKPRKFKALRGRTTRDSKRRPVNDFQSGLRRSKRSTRNRVNYRQYEASESEQEFIKPEKSNTSADHSDPSENGEYMMESEDSDRNDDEDQEMKVEEQPATYPIVEENEQNAPPEKSSSPGQEEVESIGKHHFLDLNELAPSSGFDDGPNTIMKDEDNE* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1827 752 Coils Coil 556 586 - -
Ahy11g1827 752 PANTHER REMODELING AND SPACING FACTOR 1 31 751 IPR028938 GO:0006355|GO:0031213
Ahy11g1827 752 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 31 751 - -
Ahy11g1827 752 MobiDBLite consensus disorder prediction 556 590 - -
Ahy11g1827 752 MobiDBLite consensus disorder prediction 455 752 - -
Ahy11g1827 752 MobiDBLite consensus disorder prediction 1 25 - -
Ahy11g1827 752 MobiDBLite consensus disorder prediction 534 555 - -
Ahy11g1827 752 MobiDBLite consensus disorder prediction 480 517 - -
Ahy11g1827 752 MobiDBLite consensus disorder prediction 638 673 - -
Ahy11g1827 752 MobiDBLite consensus disorder prediction 459 476 - -
Ahy11g1827 752 Coils Coil 370 390 - -
Ahy11g1827 752 MobiDBLite consensus disorder prediction 1 114 - -
Ahy11g1827 752 Pfam DDT domain 144 189 IPR018501 -
Ahy11g1827 752 MobiDBLite consensus disorder prediction 609 625 - -
Ahy11g1827 752 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 235 265 IPR028942 -
Ahy11g1827 752 MobiDBLite consensus disorder prediction 518 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1827 Ahy-Chr11 118361061 118368198 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Ahy11g1827 DDT 5.70E-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1827 - - aip:107610968 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1827 11 118361061 118368198 Ahy1g3015 1 112268909 112275653 hybridization