Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1796 ATGGCTGGTGGTGAAGTTTTGAGGCAGAATTTACCTGAGAAGCTTGAGGAATCTCCTTCTGGTGCAAATGAGCTTCATGTTTTAGCTGTTGATGATAGTCTTGTGGATAGAAAGGTCATTGAACGTTTGCTCAAGATATCTTCTTGCAAAGTGACAGTGGTGGAGAGTGGAACTAGAGCTCTTCAGTATTTGGGGTTGGATGGGGATAAGAAAAGCTCCATTGGATTTGATAGTGTGAAGGTTAATTTGATAATGACTGATTATTCGATGCCGGGGATGACTGGTTATGATCTTCTCAAGAAAATCAAGCAGGAATCGTCTGTTTTTAGAGAAATTCCAGTGGTGATCATGTCATCGGAGAATATCTTGACTAGAATTGATAGATGCTTGGAGGAAGGAGCAGAGGACTTTCTATTAAAGCCGGTGAAGTTATCCGATGTAAGACGCTTAAAAGATTTCATCATGAGAGGTGAAGTGAAGGAAGGAGAGAAAAGATGCTGCAAAAGATCGCGATCCGAAGATTGCAGCCCATCGTCAATGACTCATCCCTGCGATTCATCGCTATTGTCATCGTTGTCTTCGTCTTCAGTACTTTCACCATTGTCACCATCTACCTTGTCCTCCAAGAAATCCAGATTGTGA 642 0.4206 MAGGEVLRQNLPEKLEESPSGANELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKKSSIGFDSVKVNLIMTDYSMPGMTGYDLLKKIKQESSVFREIPVVIMSSENILTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMRGEVKEGEKRCCKRSRSEDCSPSSMTHPCDSSLLSSLSSSSVLSPLSPSTLSSKKSRL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1796 213 CDD REC_typeA_ARR 27 150 - -
Ahy11g1796 213 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 9 213 - -
Ahy11g1796 213 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 213 IPR045279 GO:0009736
Ahy11g1796 213 ProSiteProfiles Response regulatory domain profile. 26 155 IPR001789 GO:0000160
Ahy11g1796 213 MobiDBLite consensus disorder prediction 191 213 - -
Ahy11g1796 213 Gene3D - 25 180 - -
Ahy11g1796 213 SMART REC_2 25 151 IPR001789 GO:0000160
Ahy11g1796 213 Pfam Response regulator receiver domain 27 148 IPR001789 GO:0000160
Ahy11g1796 213 SUPERFAMILY CheY-like 23 154 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1796 Ahy-Chr11 115752451 115754334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1796 4 169 Response Regulator Gene Family AT3G48100 69.643 3.90e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy11g1796 Response_reg 7.30E-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1796 K14492 - gmx:100527518 293.893