Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1753 ATGCGTGGTATCAGCTATTTGAATAATAAGTACTCATCACCATCTCCATTCCAATCTCATTCGTATGATGATAATAACATGCCGCCATCATCATCTGTAATTAGCAGAATAAGTCCACTCATTCTGTTAGTTATAATAGTCTTAGCAGTTATCTTCTTCGCTTATGGCCTTGTCCATTTGATTCTATGGTTCTTCATCAAAATCCTATCATCATCGTCGTCGTCGTTCTTGTCGCCGTCTACTCTCTACAACTCTAACAGATTCCAAGAATCATCGAGGCGCTCCCGCGCGATTCAGAGACAGCTTCACCATCTCTTCCGAATGCACGATTCCGGACTAGAACAATCCACCATTGATGCTCTCCCAGTGTTCTACTACCAAGAATTGTTGGGGATGAAAGAACCATTCGATTGTGCAGTGTGCCTCTGCGAATTCTCTGCGAATGAGAAGCTGAGGTTGGTTCCAATTTGCAGCCACGCATTTCACATGAACTGCCTCGACACATGGCTTCTCTCAAACTCTACATGTCCTCTCTGTAGAGCAAATCTCTCTAGCTCTATCGTGAATCAGAATCCAGTGTTGCTTCGTGTTGTTGAGGAAGAGAATAAGAATGGTGGTGAAGGGAGTGAAGAGGAAGACGAAGGTGGTGGTGGGAGGAAAAGGGTGTTTTGTGTAAGACTTGGGAAACTGAGGAACAGTGAATTGATTCAGAGAGAAGAGGGTAGTAGTAGTAGTAGTCGTATAGGGTTGGATGGGAGAAGATGCTACTCAATGGGTTCATATGAGTATGTGGTTAGAGAATCGAATCTGAAAGTGGAAGTGGTGTTATCATCTCAGTCTCTTCATGTTGGTGGTGAAGAACAAGAAGAAGAAAATGATGATGGAAAGAAGATAGGGAAGAAGAGAACCAGAGGTGAGAGCTTCTCAGTTTCAAAGATTTGGCTATGGTCCAACAAGATCAAATATAATAATCATAGATCCAATAATGCAGATGCAGATTTTCCTTTGTCACCAATGTTAGGATTTGGTTGA 1032 0.4244 MRGISYLNNKYSSPSPFQSHSYDDNNMPPSSSVISRISPLILLVIIVLAVIFFAYGLVHLILWFFIKILSSSSSSFLSPSTLYNSNRFQESSRRSRAIQRQLHHLFRMHDSGLEQSTIDALPVFYYQELLGMKEPFDCAVCLCEFSANEKLRLVPICSHAFHMNCLDTWLLSNSTCPLCRANLSSSIVNQNPVLLRVVEEENKNGGEGSEEEDEGGGGRKRVFCVRLGKLRNSELIQREEGSSSSSRIGLDGRRCYSMGSYEYVVRESNLKVEVVLSSQSLHVGGEEQEEENDDGKKIGKKRTRGESFSVSKIWLWSNKIKYNNHRSNNADADFPLSPMLGFG* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1753 343 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 23 325 - -
Ahy11g1753 343 SUPERFAMILY RING/U-box 117 191 - -
Ahy11g1753 343 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 23 325 - -
Ahy11g1753 343 SMART ring_2 138 179 IPR001841 -
Ahy11g1753 343 MobiDBLite consensus disorder prediction 284 306 - -
Ahy11g1753 343 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Ahy11g1753 343 MobiDBLite consensus disorder prediction 283 306 - -
Ahy11g1753 343 Pfam Ring finger domain 137 180 IPR001841 -
Ahy11g1753 343 CDD RING-H2_PA-TM-RING 137 180 - -
Ahy11g1753 343 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 188 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1753 Ahy-Chr11 112148097 112149234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1753 31 321 C3H Transcription Factor Family AT2G18650 38.462 3.63e-51 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1753 - - gmx:100789990 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1753 11 112148097 112149234 Ahy11g1753 11 112148097 112149234 ECH
Ahy11g1753 11 112148097 112149234 Ahy1g1672 1 87382215 87383093 hybridization