Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1674 ATGAAGGAGAGGCAACAGTCATATGACTCTGCTTTAACAGTGGTTAAGAAAAACTGGGAACAGAAACTTCGTAGAAGCACACTCAATTCTGCAGGGTTCAACAAGCAAAGATATCACAAATTTTCTTGTACAAGAACCAATAACGTTTCTAAATGGCAAAGTTCGGCTGCTATTGTAACAATGGTTACTGGAGAGCAATCTTTGGACGCTGCTAGCGCTGAGACTGTTAGGGTTTCACTCCTCAACAAATCTGAGAGAGGCTTATACCATTATTTTCTGTTTTTGTCACGGAGGAAGAAGAAGGGAGAGAAAAAAAAAAAAAAAAAAGAAGCAGGTTGTGAAAACCTTATCATCCAACAAGGGAAAGGGAATAAAGAAAAAAAAAAGAGAATCAAGAAGAAGATGGCATCATCAAGCTCGTACAATTCACCTTGCGCTGCCTGCAAATTCTTGAGGAGGAAGTGCATGCCAGGGTGTATCTTTGCGCCTTATTTTCCACCCGAAGAGCCTCAAAAGTTTGCAAACGTGCACAAGATCTTCGGGGCAAGCAACGTTACCAAGCTCCTCAACGAGCTTCTGCCTCACCAGAGGGAGGATGCGGTCAACTCCCTCGCTTACGAGGCAGAAGCTCGCGTTAGAGATCCTGTTTACGGCTGCGTTGGCGCCATATCTTTCCTCCAAAGACAAGTGCAAAGACTTCAGAAGGAACTTGATGCCGCCAACGCTGATCTTCTCCGCTATTCCTTTACTGACATCGCTCCGACACCGGCTCTTTCTATGCCCCCCGGACTAACCAATGCTACTTCCCTTCAACAAATTCCCCAAAGGTTTGGGGCAAGATTTGATAACGAAGGAAGTGGATTCTATAACAATAATCGCCAATATTCACCTAATATTTATTCTTACCCATACTCTCTTCCATGGACCGATACCTCTTCCAAGGATATCAGCGATGGGGGCGGGTTAGGTGACGGCGATGGAAGAGGAGGTAATTTGTGA 999 0.4474 MKERQQSYDSALTVVKKNWEQKLRRSTLNSAGFNKQRYHKFSCTRTNNVSKWQSSAAIVTMVTGEQSLDAASAETVRVSLLNKSERGLYHYFLFLSRRKKKGEKKKKKKEAGCENLIIQQGKGNKEKKKRIKKKMASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSFTDIAPTPALSMPPGLTNATSLQQIPQRFGARFDNEGSGFYNNNRQYSPNIYSYPYSLPWTDTSSKDISDGGGLGDGDGRGGNL* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1674 332 PANTHER ELONGATED PETIOLULE 1 135 320 - -
Ahy11g1674 332 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 135 320 - -
Ahy11g1674 332 Coils Coil 223 243 - -
Ahy11g1674 332 Pfam Lateral organ boundaries (LOB) domain 144 241 IPR004883 -
Ahy11g1674 332 ProSiteProfiles LOB domain profile. 143 244 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1674 Ahy-Chr11 99884166 99894360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1674 135 253 AS2 family AT5G63090 90.833 2.19e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy11g1674 LOB 1.10E-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1674 - - ahf:112722314 603.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1674 11 99884166 99894360 Ahy11g1674 11 99884166 99894360 ECH
Ahy11g1674 11 99884166 99894360 Ahy17g0014 17 211228 213732 PCT
Ahy17g0014 17 211228 213732 Ahy11g1674 11 99884166 99894360 PCT