LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy11g1653	ATGGACACCCTCCAATTTTTCCTCTTCATATTCCAGCTTTTACTCTGCCTCAACCCAATCTCCGCGGTGGACTTCCTCTTCAACTCCTTCACTGGCATCACCAACACCACCAACGTGACCCTCATCGCCGACGCACTCGTAGACTCCTCCGTCGTCCGCATGACCAACGACTCCAACCAATACTCCTTCGGCAGAGCCTTCTACCCTAAAAAAGTCACCATCAAGAAACCCTTCCCTTCTTCTTCTTCTTCAAGCAACTTCTCTTCCTTCTCAGCCTCCTTCGTCTTCTCCATCTTGCCGCAGATCCCGACGAGTCCCGGCTTTGGCCTCGCTTTCGTTCTCTGCAACACAACCTCCCCTCCCGGCGCACTCGCCAGCCAGTACTTCGGTCTCTTCACCAACGCCACCTCACCTCCCCTGTTCCCGCTCCTCGCCGTCGAGTTTGACACAGGCCAGAACCCTGAGTTCGGCGACCCCGACGACAACCACCTCGGCATCGACCTCAACAACATCGTCTCCAAGAAAACTCAGTCCGCAGGGTACTACAACTCCACCGGAGGATTCGTCCCCCTTCGAATGCGAACGGGACAGAACGTTCACGCTTGGATCGATTTCGACGGCGAGACTATGCAGATCAACGTCACCGTCGCTCCGGCGGGCCTTCCCCGCCCGATGAAGCCAACTCTCTCGTACACAGACCCGGAAATGGCGAACTACTTGTCTTCTGATATGTTCGTTGGGTTCTCTGCTTCGAAAACCAATTGGATCGAGGAACAGAGAGTACTCGCATGGAGTTTCAGCACTTTAGGTTCCGCAAGAGACATAAACACAACTAATTTACCAGCTTTCCAGCCTACAACCTCCTCTTCCTCTCTCTCCGGCGGCGCAATCGCCGGAATCGTTCTCGGCTGCGTCGCTTTCGTGGCAATCTTGGTCTCGATCTGTTACCTGTGGTGGCGAAAGAAGATGAAGGAGCAAGAAGAAGAGATCGAGGATTGGGAACTGGAGTACTGGCCCCACAGATTCTCCTACGACGAACTCAGAACCGCAACGGGAGAATTCAGGAGGGAGAATCTTCTAGGCTCCGGCGGGTTTGGAAGAGTATACAGAGGAATGCTTCAGAACAAAACAGAGGTTGCGGTGAAATGCGTCAACCACGACTCAAAGCAAGGCGTGAGGGAATTCATGGCGGAAATTTCAAGCATGGGGAGACTGCAGCACAAGAACTTGGTCCAAATGAGAGGGTGGTGCAGAAAAGGAAACGAGCTTATGCTGGTTTATGACTTCATGCCCAACGGGAGCCTCAACAAGTGGGTGTTTGACAACCCGCCGAAGCTTCTAGAATGGGGGAGGAGGCGAAGGGTGCTCGTCGACGTGGCGGAGGGGCTCAACTACCTTCATCACGGGTGGGACCAGGTTGTTATTCACAGGGATATTAAGTCTAGTAATATCTTGCTAGACTCTGAAATGAGGGGGAGGCTTGGGGACTTTGGTTTGGCGAAGCTATACCAGCAGGGGGAGGTTCCCAACACCACGCGTGTCGTTGGCACATTGGGGTACCTCGCGACAGAGTTGGCTACCGTGGCGGTGCCAACTTCGGCAAGTGATGTTTATAGTTTTGGAGTGGTGCTTTTGGAGGTGGCATGTGGGAGGAGGCCCATTGAGACGTCGGCGGCGGAGGAGGAGGTGGTGCTAATTGACTGGGTGAGGGAGCTGTACGCCCGGGGGAGGATGTGTGACGCTGCGGACCCGAGGATTGAAGGGGAGTATGAGGTTGGGGACATGGAGATGGTGCTCAAGCTTGGGTTGGCTTGTTGCCACCCTGAGCCTCAGAGGAGGCCAACGATGAAGGAGGTGGTTGCAGTGCTTGTGGGGGACAATGTTGCGGAGGAGCCGGGGAAAGTGTTGTCTGATTTGGTGCGTGGCGACGGTGGTGGTCCGGAGAAAGAGGAGGAGACCACGGCTTTACAGGGAAACCTTCCGGATTGA	1989	0.548	MDTLQFFLFIFQLLLCLNPISAVDFLFNSFTGITNTTNVTLIADALVDSSVVRMTNDSNQYSFGRAFYPKKVTIKKPFPSSSSSSNFSSFSASFVFSILPQIPTSPGFGLAFVLCNTTSPPGALASQYFGLFTNATSPPLFPLLAVEFDTGQNPEFGDPDDNHLGIDLNNIVSKKTQSAGYYNSTGGFVPLRMRTGQNVHAWIDFDGETMQINVTVAPAGLPRPMKPTLSYTDPEMANYLSSDMFVGFSASKTNWIEEQRVLAWSFSTLGSARDINTTNLPAFQPTTSSSSLSGGAIAGIVLGCVAFVAILVSICYLWWRKKMKEQEEEIEDWELEYWPHRFSYDELRTATGEFRRENLLGSGGFGRVYRGMLQNKTEVAVKCVNHDSKQGVREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDFMPNGSLNKWVFDNPPKLLEWGRRRRVLVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSEMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLATELATVAVPTSASDVYSFGVVLLEVACGRRPIETSAAEEEVVLIDWVRELYARGRMCDAADPRIEGEYEVGDMEMVLKLGLACCHPEPQRRPTMKEVVAVLVGDNVAEEPGKVLSDLVRGDGGGPEKEEETTALQGNLPD*	663

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy11g1653	662	ProSiteProfiles	Protein kinase domain profile.	354	629	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy11g1653	662	ProSitePatterns	Protein kinases ATP-binding region signature.	360	382	IPR017441	GO:0005524
	Ahy11g1653	662	ProSitePatterns	Legume lectins beta-chain signature.	144	150	IPR019825	-
	Ahy11g1653	662	SUPERFAMILY	Concanavalin A-like lectins/glucanases	21	283	IPR013320	-
	Ahy11g1653	662	PANTHER	-	7	654	-	-
	Ahy11g1653	662	Gene3D	Transferase(Phosphotransferase) domain 1	430	632	-	-
	Ahy11g1653	662	Coils	Coil	316	336	-	-
	Ahy11g1653	662	PANTHER	L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1	7	654	-	-
	Ahy11g1653	662	CDD	STKc_IRAK	360	623	-	-
	Ahy11g1653	662	Pfam	Legume lectin domain	23	280	IPR001220	GO:0030246
	Ahy11g1653	662	Gene3D	-	21	283	-	-
	Ahy11g1653	662	CDD	lectin_legume_LecRK_Arcelin_ConA	23	268	IPR001220	GO:0030246
	Ahy11g1653	662	SUPERFAMILY	Protein kinase-like (PK-like)	330	623	IPR011009	-
	Ahy11g1653	662	Gene3D	Phosphorylase Kinase; domain 1	339	429	-	-
	Ahy11g1653	662	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	474	486	IPR008271	GO:0004672\|GO:0006468
	Ahy11g1653	662	Pfam	Protein kinase domain	355	620	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy11g1653	662	SMART	serkin_6	354	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy11g1653	662	MobiDBLite	consensus disorder prediction	634	662	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy11g1653	Ahy-Chr11	92165793	92168372	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy11g1653	21	625	Receptor kinase-like Gene Family	AT1G15530	66.941	0.0	802

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Ahy11g1653		Pkinase	5.30E-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy11g1653	-		-	lang:109362483	998.808