Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1605 ATGGCTTCAATTGGGGTGTCAGAGATGCTTGGAAACCCCATTAAGTTGAGTGGTGCAGCAAGGTCAGCACCATCAGCTTCTACCCCTGCCACCTTCAAGACTGTGGCACTCTTTGGTAAGAAGAAGGCAGTACCACCTCCTCCTTCAAAGAAAGCTGCTGCTGCTATCACTCCTGCCAATGATGAACTCGCCAAGTGGTTTGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCCAAGATCCGACCATACTTGACTGGAGAAGTGCCCGGAGACTATGGTTATGATCCTTTTGGTCTCAGCAAGAAGCCAGAGGACTTTGCCAAGTATGTCTTAACACTTTTTTTCAAACTTGATATATATCCTTTTGGTCACATTAGTTTACGAACTGCTTTTCATACATTTATTATTTGA 426 0.4554 MASIGVSEMLGNPIKLSGAARSAPSASTPATFKTVALFGKKKAVPPPPSKKAAAAITPANDELAKWFGPDRRIFLPEGLLDRSKIRPYLTGEVPGDYGYDPFGLSKKPEDFAKYVLTLFFKLDIYPFGHISLRTAFHTFII* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1605 141 Gene3D Chlorophyll a/b binding protein domain 73 116 - -
Ahy11g1605 141 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 115 - -
Ahy11g1605 141 SUPERFAMILY Chlorophyll a-b binding protein 86 115 - -
Ahy11g1605 141 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 115 IPR001344 GO:0009765|GO:0016020
Ahy11g1605 141 Pfam Chlorophyll A-B binding protein 87 114 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1605 Ahy-Chr11 80387019 80389552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1605 1 114 Chloroplast and Mitochondria Gene Families AT4G10340 60.870 8.22e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1605 K08916 - ahf:112736459 192.586