Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1598 ATGGCGGCGATACCGTCGTCGAACCGTTCCCCCGACGACTTCACCGTCGATCAAACGCCGCTAATCGCGAACTCTAACGGCGGCGGTGGTGGAGGCACCTACGACGAATCGAACTCCGGCCGCAGATTTGTTCGGCGGCAGAGCCTCCGCCAGGCTGCGCGGTTTCTCCGGCAGGGGAGCGGGCGTAGGTCGATGCGGGAGCCGTCGATGGTGGTGAGGGAGACGGCGGCGGCGCAGCTGGAGGAGCGGCAGAGCGATTGGGCGTACTCGAAGCCGGTGGTGGTGCTCGACGTCCTCTGGAACTTCGCGTTCGTGGTGGCAGGCGCTACTGTGCTAGTCCTGAGCCGGAACGAGTCGCCGAACGTGCCGCTGAGGTTGTGGATCTTAGGGTACGCGGCGCAGTGCATTGTCCACGTGGCGTGCGTGTGCGTTGAGTATCGGAAGAGGAGGAGGAGGACGGAGCAGCAGCAGCAGAGCACGAGCGACGTCGTTCAAGGTGTTAATGGAGTTGGCGTTGGGGGGAGTGGAGATTTAAGCTCCGGTTCCATGGAAGGTTCTGGACACTATTTGACATTGGCTCAATTCGATGAGGACGGCACAAGCATGCCAAAGCATTTGGAATCAGCCAACACAATGTTTTCCTTTATTTGGTGGGTTGTCGGGTTCTATTGGGTATCAGCTAGTGGTCAAGACTTAGCCCAAGAGGCTCCTCTGCTTTATTGGTTATGTATAGTCTTCCTGGGTTTCGATGTTTTCTTTGTCGTTTTCTGCATTGCACTGGCATGCATCATTGGTATTGCTGTTTGCTGTTGTCTTCCGTGCATCATTGCACTTCTATATGCAGTTGCAGACCAGGAAGGGGCATCTAAAGAAGATATTGAGCAGTTGTCGAAATTCAAATTCCAAAGGAATGAAAATAATGAGAAACTCACTGATAATACACAAGTATCTGCTGGGGGAGTAATGATAGAATGCCGAGTTGATTCACCTATTGAACATGTTCTTTCTGACGAGGATGCGGAATGTTGCATCTGCCTTTCTGCATATGAGGATGGTGTTGATCTAAGACAACTTCCCTGTGGTCACCATTTTCACTGTGCTTGTGTGGACAAATGGCTATACATTAATGCTACCTGCCCCCTCTGCAAGTATAATATCCTAAAAAGTAGCAGAAGTGCTCAAGAGGAAGTGTAG 1194 0.5235 MAAIPSSNRSPDDFTVDQTPLIANSNGGGGGGTYDESNSGRRFVRRQSLRQAARFLRQGSGRRSMREPSMVVRETAAAQLEERQSDWAYSKPVVVLDVLWNFAFVVAGATVLVLSRNESPNVPLRLWILGYAAQCIVHVACVCVEYRKRRRRTEQQQQSTSDVVQGVNGVGVGGSGDLSSGSMEGSGHYLTLAQFDEDGTSMPKHLESANTMFSFIWWVVGFYWVSASGQDLAQEAPLLYWLCIVFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRNENNEKLTDNTQVSAGGVMIECRVDSPIEHVLSDEDAECCICLSAYEDGVDLRQLPCGHHFHCACVDKWLYINATCPLCKYNILKSSRSAQEEV* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1598 397 MobiDBLite consensus disorder prediction 1 40 - -
Ahy11g1598 397 CDD RING-H2_RNF111_like 341 385 - -
Ahy11g1598 397 Pfam Ring finger domain 341 383 IPR001841 -
Ahy11g1598 397 ProSiteProfiles Zinc finger RING-type profile. 342 383 IPR001841 -
Ahy11g1598 397 PANTHER TARGET OF ERK KINASE MPK-1 5 397 - -
Ahy11g1598 397 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 326 390 IPR013083 -
Ahy11g1598 397 SUPERFAMILY RING/U-box 331 388 - -
Ahy11g1598 397 SMART ring_2 342 382 IPR001841 -
Ahy11g1598 397 MobiDBLite consensus disorder prediction 1 33 - -
Ahy11g1598 397 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 5 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1598 Ahy-Chr11 77268781 77273463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1598 45 390 C3H Transcription Factor Family AT1G68070 50.852 3.81e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1598 - - ahf:112722254 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1598 11 77268781 77273463 Ahy5g0886 5 12478381 12482493 PCT