Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy11g1514 | ATGGATGGTAGAAGGCATTCAGTTGATATTCCAATTTCCAAAACTCTTGTGGCACTGAGGAGGGTGAGGTCACTGAGGGATCCATCAACTAACTGCATTAACAAGCTCTCTCCTTTGATTGACAATGTTCAATGGGAAAACGGTTCCAATAATGGGATTTCGCTGCACTTCCTCGAAGCTTCTCATGCATGCGGTTCTAGTGATAACAATGATGGTTTTAGATCAAAGACTTTAGAATTCAAGGGACATAGAGAGCAGGATACTGCTGATTTTGAGCTGAATTGTGGCCTTTTGAACTCTAAGAGGAACTATCATGGGATATCCTGCCAGGAAACAAAGCGAGACGACGAGCTAGTTTATTCTAATGCTTATCAGCAAGGCATTGTTGGGAATAAATCACCGAGTGAAAGCTGTAGCAGCAACTATGGAGGTAGAGGGTTGGATCTGGCTGGCATGGTGCCGTCTGTTAATCATTTGAGGGACGGGGAATTGTGCTATTTATCTTCGCAGTTAGGGAGGGTAGATAACTTGAAGCAAACCCGAAAGTCGCAGCGCAGGACTACAAAAGTTAAACCATCTGAAGCGACAGGTGATACTGTGAGCCATGTAGGTAGTCCACACCTTTCTTTTGGTGATGCTCTCTCAGCTCATAGTGCTTCAGTACGAATAACTCAAGATGCTTTGGATAATCTACATGGATGTGGAATAAGCTGTTGTTGGTCAAAATCACCAAGATTTAGAGAATCAAATCATTATTCTGAAGTAGAAGATCTTCCTTTGTTATTGCAGCAAGCTAATGAGACTGATCTTTATGGATGCAGAAGCACAAGAAACGTAGGTGGCGGAGATAGTCCAAATTTGGAAACTCCAAGAAGTTTATCAATGAAATTTAAGCCAAAATCTTTTGGTGATTTGGTGGGGCAAAATGTGGTTGGAAGGTCACTTATGGGGGCCATTTCCAGTGGAAGGATAACATCATTTTACCTTTTCCATGGTCCCCGTGGTACCGGAAAGACATCTGCGTCTAGGATATTTTCTGCGGCATTAAATTGCCTATCCCTTGAGGTGCAAAGGCCATGTGGTATGTGTAAAGAGTGTATTTCGCTCTTTTCTGGAAGAAGTAAAGATGTTAAGGAAGTGGATTCCTTGAGAATCAACCATGTAGACAAGGTTAAGTCCCTAATTAAGAGTGCTTGTATTCCTCCGGTTTCGTCACGCTTTAAGGTGTACATTATCGATGAGTGCCAGTTCTTGAACGGGGAAACATGGGCTACTCTTTTGAATAGCCTAGATAATGTTTCTCAATATGTGGTTTTTGTGATGATCACTCCTGATTTGGATAACCTTCCTCGAAGTGTGGTTTCCCGGGCTCAGAGGTATCACTTTCCAAAGATTAAAGATGTTGATATCGCGAGCAGATTAGAAAAAATCTGTGTTGAAGAAGGTCTTGATTTTGAACAAGTTGCTTTGGATTTTATTGCTGCTAAATCTTGTGGTTCTCTTAGAGATGCAGAAATGATGCTTGATCAGCTGAGTTTGCTTGGTAAAAAAATCACACTTACCTTAGCCCATGAGCTCACTGGTGTCGTTTCAGATGATGAATTGCTTGACTTGTTGGACCTGGCTTTGTCATCTGACACTTCAAATACAGTTATAAGAGCCCGGGAGCTGATGAGATCGCGGATAGATCCATTACAACTTGTTTCACAGCTTGCAAATCTTATTATGGACATTCTTGCAGGGAAGTCTGAAGTCGGTGATTCCGAAATCAGAAGAAGATTCTTGATTAGACAAACCTCTGAAGCAGACATGCAGAAATTGAGTCATGCGTTAAAAGTACTTTCAGAAACAGAGAAGCAATTGAGAATTTCAAAGAATCAAAGAACATGGTTCACAGCAGCGCTTCTACAATTAAGTGCCGAAGAATATCCACCTGCTGATGCAACTGATGACAAGTTGTATTTGAAAGGTGCTACCAATAGAGATGGTGATTTCTGTAGTACTTCATCAACAGGGGAGAGCTTGAAGAATAATGCTACAGGTCAATGTGATGAAAAGTCATATAGATTAGGATTGCAAGAGGATCAGAAAAGAACTTTGGATTCCATATGGTATAAAGCTACAGAGATATGCCAATCAAGCCGGCTCAAGGCTTTTCTCAGGAAGCAGGGAAAGTTATCTTCGCTTTGTGTCAATCAAGGCCTTGCAGCTGCTGAGTTGGAATTCCACCGTCGTGACAGTGTAGCTAGAGCCGAGAAGTCGTGGAAACTGATTGCAAGTTACCTGCAGATCATATTGGGTTGCAACATTGAGCTCAGGATCAATTACGTACCTTGTGCCACAGCTTCTAGGTATGCCAGACTAAAGAGGTCATCTTTCAATTTCTTTAATTGTTCCCGAAGAATTCTACGGAAATCGATGCCTTCTGACGACCAAGGAAGCGAATCAGACTATGCTGATCAAACTTCTGAGAAGCCTATGATGAAAGATCAGACTCTAACTTGTTCCTCTGAGTTTGGTTCTCGGGTGCCACTACCTGATGTTGTAGCAGCTTTGAGAAGTTGCGAAGGTAATCTGCTAAGCTCGGGGAAAACATTCTTGAATATGTCTACTCAAGAGACTCCAAGGAATTCATGTTCTAGAGCTGATTCTCTTAAGGAAGAGGAATGCAATCAGGCCCATTTACCTTCGTCAAACATCGATTTAGACTATCAATCTAAGTGTTTTCCTCGAACCTTCTGGCTTCATAAGAAATTCTGTTCATCGCATGCATCGGAACAGAAGGATTTTGTTTTCTCAAGCCACTATGTTTATCCCCCACAACTCTAA | 2829 | 0.4182 | MDGRRHSVDIPISKTLVALRRVRSLRDPSTNCINKLSPLIDNVQWENGSNNGISLHFLEASHACGSSDNNDGFRSKTLEFKGHREQDTADFELNCGLLNSKRNYHGISCQETKRDDELVYSNAYQQGIVGNKSPSESCSSNYGGRGLDLAGMVPSVNHLRDGELCYLSSQLGRVDNLKQTRKSQRRTTKVKPSEATGDTVSHVGSPHLSFGDALSAHSASVRITQDALDNLHGCGISCCWSKSPRFRESNHYSEVEDLPLLLQQANETDLYGCRSTRNVGGGDSPNLETPRSLSMKFKPKSFGDLVGQNVVGRSLMGAISSGRITSFYLFHGPRGTGKTSASRIFSAALNCLSLEVQRPCGMCKECISLFSGRSKDVKEVDSLRINHVDKVKSLIKSACIPPVSSRFKVYIIDECQFLNGETWATLLNSLDNVSQYVVFVMITPDLDNLPRSVVSRAQRYHFPKIKDVDIASRLEKICVEEGLDFEQVALDFIAAKSCGSLRDAEMMLDQLSLLGKKITLTLAHELTGVVSDDELLDLLDLALSSDTSNTVIRARELMRSRIDPLQLVSQLANLIMDILAGKSEVGDSEIRRRFLIRQTSEADMQKLSHALKVLSETEKQLRISKNQRTWFTAALLQLSAEEYPPADATDDKLYLKGATNRDGDFCSTSSTGESLKNNATGQCDEKSYRLGLQEDQKRTLDSIWYKATEICQSSRLKAFLRKQGKLSSLCVNQGLAAAELEFHRRDSVARAEKSWKLIASYLQIILGCNIELRINYVPCATASRYARLKRSSFNFFNCSRRILRKSMPSDDQGSESDYADQTSEKPMMKDQTLTCSSEFGSRVPLPDVVAALRSCEGNLLSSGKTFLNMSTQETPRNSCSRADSLKEEECNQAHLPSSNIDLDYQSKCFPRTFWLHKKFCSSHASEQKDFVFSSHYVYPPQL* | 943 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy11g1514 | 942 | Gene3D | - | 529 | 641 | - | - | |
Ahy11g1514 | 942 | CDD | HLD_clamp_pol_III_gamma_tau | 465 | 528 | IPR045085 | - | |
Ahy11g1514 | 942 | TIGRFAM | dnaX_nterm: DNA polymerase III, subunit gamma and tau | 292 | 638 | IPR012763 | GO:0003887|GO:0005524|GO:0006260|GO:0009360 | |
Ahy11g1514 | 942 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 318 | 514 | IPR027417 | - | |
Ahy11g1514 | 942 | PANTHER | REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT | 109 | 906 | - | - | |
Ahy11g1514 | 942 | SUPERFAMILY | post-AAA+ oligomerization domain-like | 535 | 637 | IPR008921 | GO:0003677|GO:0006260 | |
Ahy11g1514 | 942 | Gene3D | - | 286 | 463 | IPR027417 | - | |
Ahy11g1514 | 942 | MobiDBLite | consensus disorder prediction | 806 | 827 | - | - | |
Ahy11g1514 | 942 | Pfam | DNA polymerase III, delta subunit | 308 | 465 | - | - | |
Ahy11g1514 | 942 | MobiDBLite | consensus disorder prediction | 812 | 827 | - | - | |
Ahy11g1514 | 942 | CDD | AAA | 328 | 456 | - | - | |
Ahy11g1514 | 942 | MobiDBLite | consensus disorder prediction | 178 | 204 | - | - | |
Ahy11g1514 | 942 | PANTHER | DNA POLYMERASE III SUBUNIT GAMMA/TAU | 109 | 906 | - | - | |
Ahy11g1514 | 942 | Gene3D | - | 467 | 528 | - | - | |
Ahy11g1514 | 942 | MobiDBLite | consensus disorder prediction | 178 | 192 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy11g1514 | Ahy-Chr11 | 65693407 | 65699233 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy11g1514 | 284 | 621 | Core DNA Replication Machinery Family | AT1G21690 | 25.882 | 1.47e-14 | 74.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy11g1514 | - | - | pvu:PHAVU_003G207500g | 1222.99 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g1514 | 11 | 65693407 | 65699233 | Ahy11g1514 | 11 | 65693407 | 65699233 | ECH |