Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1392 ATGAACACCTTCTCCCACGTACCTCCAGGCTTTCGTTTTCATCCGACTGATGAAGAATTAGTTGACTACTACCTTAGGAAAAAGGTAGCATCCAAAAAGATTGATCTAGATGTCATCAAAGATGTTGATCTCTATAAAATTGAGCCATGGGATCTTCAAGAACTATGCAAAATAGGAAGCGATGAAGAAAATGACTGGTATTTCTTCAGTCATAAAGATAAGAAGTACCCAACAGGAACAAGAACGAATAGGGCAACAAAAGCAGGGTTTTGGAAAGCCACGGGAAGAGATAAAGCAATATACTCAAAGCAGCATTGCCTTATTGGAATGAGAAAGACTCTTGTCTTCTACAAAGGAAGAGCTCCTAATGGCCACAAGTCTGACTGGATCATGCATGAGTATCGCCTTGAAACCAATGAAAATGGAACTGCTCCGGAAGAAGGGTGGGTTGTATGTAGAGTGTTCAAGAAGAAAATGGCAACAGTGAGGAAAATTGGAGACTATGATTCACCATGTTCTTGGTACGATGAACAAGTTCCCTTCATGCAAGATCTTGAATCCTCATCCCCAATAAAGCCACCAATAATTAACAACAACCATTATGCTTCTTCATACAACTACCACCAGTTACAATTACCCTGCAAACCGGAATTCCATCAACTTATGCAATACAACAACATGAACATGCCACGTCACGACGACGCTGCTGATAATAACAACAACTTCCTCCAACTTCCTCAGCTTGAAAGCCCTAATGGTGGAATTAGCCCCTTCTTGCAACAACAAGATCATCATCATCAGCTATTGCAACAACAAAATTCCAACAGCAATTATCATCTTGATCAAGTAACCGATTGGCGAGTTCTCGATAAATTCGTTGCGTCGCAGCTCATGAGTCATGGTCATGATGATAATGATGACGATGGCCACAACAATAATAATAATGTTTCCAAAGAAGTAATAAACAGTTATTCTGATGCTTCAATTCTCCATGTGGCTCAACAGATTGCTATGCTGGCAAATGGATCGTCATCTTCATCATCATCAAGGAGGCCTCAAATTTCTCATCAGGAATATGCTGCTTCAACTTCCACATCAAGTTCTCAGATTGATCTCTGGAAGTCATCGTCATGA 1134 0.4048 MNTFSHVPPGFRFHPTDEELVDYYLRKKVASKKIDLDVIKDVDLYKIEPWDLQELCKIGSDEENDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYSKQHCLIGMRKTLVFYKGRAPNGHKSDWIMHEYRLETNENGTAPEEGWVVCRVFKKKMATVRKIGDYDSPCSWYDEQVPFMQDLESSSPIKPPIINNNHYASSYNYHQLQLPCKPEFHQLMQYNNMNMPRHDDAADNNNNFLQLPQLESPNGGISPFLQQQDHHHQLLQQQNSNSNYHLDQVTDWRVLDKFVASQLMSHGHDDNDDDGHNNNNNVSKEVINSYSDASILHVAQQIAMLANGSSSSSSSRRPQISHQEYAASTSTSSSQIDLWKSSS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1392 377 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Ahy11g1392 377 Pfam No apical meristem (NAM) protein 8 136 IPR003441 GO:0003677|GO:0006355
Ahy11g1392 377 MobiDBLite consensus disorder prediction 342 377 - -
Ahy11g1392 377 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 326 - -
Ahy11g1392 377 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Ahy11g1392 377 PANTHER NAC DOMAIN-CONTAINING PROTEIN 7-LIKE 4 326 - -
Ahy11g1392 377 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1392 Ahy-Chr11 53546892 53552193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1392 1 374 NAC Transcription Factor Family AT1G12260 54.453 3.18e-130 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy11g1392 NAM 3.50E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1392 - - aip:107606832 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1392 11 53546892 53552193 Ahy11g1392 11 53546892 53552193 ECH
Ahy11g1392 11 53546892 53552193 Ahy1g1365 1 44477831 44483507 hybridization
Ahy5g0954 5 13980710 13983527 Ahy11g1392 11 53546892 53552193 PCT
Ahy11g1392 11 53546892 53552193 Ahy5g0954 5 13980710 13983527 PCT