Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1321 ATGTGTGAGAACGAAGATGCTTGTCAAGAGAATGCCTATACTAGAAATGGATCAAAGAATGTGGATCAGGATACGACTCACAATACTACCGAGAGTGAGTTTTTCTACCGAGACATGGGAGAATTTGGTGACGTTGAAGGGATACATGTGGAAGACATAATGAAGAAGGTATTTAGGACTGATGAGGACGCGTATGAGTTCTATAAGAATTTTGGAAAATATCACGGCTTTGGAGTTAGGAAGGGGCATTCCTGGAAGGATGAGGATGGTATTGTCACCGGGCGGAGGTTCTTCTGCAATAGGCAAGGTTTGAGAGATGCAAAGCACTATAATCGGTTAGATAGGATGAGGGTTCACAAACCAGAAACGAGGACTAATTGCGAGGCGAAGTTCTCCATATACCTTGACAAGAGTGCTTCTCTGTGGCGAGTAAGGAAAATTGAAAATAAGCACAATCATGACTTGACCCCTAGTTGCATGGTGCATTTGATTGTGAAGTATCGGTCACTCACGGATGCTGCCAAAGCTCAGATAGATGGGTTGAACGAGTGTGGAATTTCGACAGCAAAGACTGTACGATATATGGCCGGGATGGCTGGAGGATACTCGTTGGCTGGCTTCTTGAAGAAGGATGCCTATAATCACATTGCTAAAAGAAGGTGTGTAACGATTGCGGAGGGCGATGCAGAAGCTGCGCTTGCATATTTAGAAGGTAAGATAGAATCGGATCCGATGGCCATGGCACGGTACAGTTTGACCGATGAGGGAATGCTAGGTAATATGTTTTGGGCCGATAGGGGCAGCCGAGTTGATTACCAGTACTTCGGGGATGTCCTTGCGTTCGATGCGACATACAAAAAGAACAAGTATAGGCGGCCATTGGTAATCTTCTTAGGGGCCAACAACCACAAGCAGACCACTATTTTCGGTTTTGGTTTAGTAATGGATGAGACATTTGATTCGTATAAGTGGATATTGCAGAATATGTTGGAGGTGATGTGCATGAAGGAGCCATCAGTGGTTGTTACAGATGGGGATGAGGCGATGCGTAAAGCCATAGCTTTAGTATTTCCGAAGGCCACCCACCGCTTATGTGCATGGCATTTTCAGAAAAATATCACGGCCAACGTGAAGGAGCCATCACTCCGATCACGATTTAACCGATCGTTATATGTGGACATCGAGATTCGTGAATTCTTGACTGAGTGGGATCTAGCGGTTGAAGAGTTCAAACTTCAAGATAGCCTATGGGCGAGGCAGGTGTTTGGTAAGAAGGAAATGTGGGTGAATGTGTATCTGAAGAATAAATTTTGCGCCGGGTTTAGGACCACATCTCAATGCAAAGGTATAAACGCTGTGGTCAAAAATTTCCTTCAATTGAAGCATACTATTCTTGAGCTTGTGCAGAACCTGGAGCTAATGGTACGTGATTATCAGAATAACGAGCTTCTAGCCCAGTTCAGAACCATTGACACTTTCCCAGTAATGACGACCAGCCTCGACGCAATAGAGCGGTTCGCTGCGCTGACATATACGAAAGAAGTATTTGCAGACGTGAAACGAGAGATTGAACGAGTTGCAGTTGTTAATCTGGTTCGGGTAAGAAGATCTCTAAACACAAGGGTATACTCATTGGAAGAGTACGGATCTCTTGAGAGAGTTATTCTAGTACTGTTTGATTGA 1683 0.445 MCENEDACQENAYTRNGSKNVDQDTTHNTTESEFFYRDMGEFGDVEGIHVEDIMKKVFRTDEDAYEFYKNFGKYHGFGVRKGHSWKDEDGIVTGRRFFCNRQGLRDAKHYNRLDRMRVHKPETRTNCEAKFSIYLDKSASLWRVRKIENKHNHDLTPSCMVHLIVKYRSLTDAAKAQIDGLNECGISTAKTVRYMAGMAGGYSLAGFLKKDAYNHIAKRRCVTIAEGDAEAALAYLEGKIESDPMAMARYSLTDEGMLGNMFWADRGSRVDYQYFGDVLAFDATYKKNKYRRPLVIFLGANNHKQTTIFGFGLVMDETFDSYKWILQNMLEVMCMKEPSVVVTDGDEAMRKAIALVFPKATHRLCAWHFQKNITANVKEPSLRSRFNRSLYVDIEIREFLTEWDLAVEEFKLQDSLWARQVFGKKEMWVNVYLKNKFCAGFRTTSQCKGINAVVKNFLQLKHTILELVQNLELMVRDYQNNELLAQFRTIDTFPVMTTSLDAIERFAALTYTKEVFADVKREIERVAVVNLVRVRRSLNTRVYSLEEYGSLERVILVLFD* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1321 560 Pfam MULE transposase domain 278 372 IPR018289 -
Ahy11g1321 560 Pfam FAR1 DNA-binding domain 66 156 IPR004330 -
Ahy11g1321 560 PANTHER OS02G0262500 PROTEIN 51 534 - -
Ahy11g1321 560 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 534 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1321 Ahy-Chr11 46442475 46444157 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g1321 MULE 7.50E-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1321 - - aip:107606218 776.933