Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1302 ATGACGCGACGATGCTCCCATTGCAGCCACAATGGGCATAACTCGAGGACATGCCCGAACCGCGGCGTCAAGCTTTTTGGGGTCCGATTGACCGATGGCTCGATCCGGAAGAGCGCTAGCATGGGCAATCTTACCCACTACGCCGGTTCCGGGTCCGGTTCAGGACCTATCCACGCTTCTGGGTCCAATAACCCCGGTTCGCCCGGGGATAACCACGATAACGCGGCTACCGCTGACGGTTATGCTTCCGAGGACTTCGTTCCTGGCTCCTCTTCTAGCTCCCGTGAAAGAAAGAAGGGGGTTCCATGGACTGAGGAGGAGCATAGAATGTTTTTACTTGGATTACAAAAGTTGGGCAAAGGTGATTGGCGTGGAATCGCAAGGAACTATGTTATATCAAGGACCCCTACTCAAGTGGCCAGTCACGCTCAAAAGTATTTCATCAGGCAAAGCAATGTGTCTAGACGGAAAAGACGCTCCAGCTTGTTTGACATTGTTGCAGATGAAGCAGCTGATGATACTCCAATGGTACAGCAAGACTTCTTATCAGCTAACCAGTTACAGGCTGAAACAGAAGGCAATAACCCCTTGCCTGCGGTTCCCACCCTCGACGAAGAATGTGAATCCATGGATTCCACCAACTCCAATGATGGAGATTCTGCGCCATTAAAGCCTGAAAACTCTCAACCACCACAACAGCAGTCATCTTATCCGGTGCTGTATCCTGCATACTATTCTCCTTTCTTCCCATTTCCTCTGCCCTATTGGTCAGGGTACAGTCCAGAGCCTAATACTGTGAAGGAGGAGACACACGAGGTGCTGAAGCCAACTGCAGTGCATTCCAAAGCACCAATAAACGTTGACGAACTCGTTGGCATGTCAAAACTGAGCTTGGGAGAGACTATTGCAGACTCAGGCCCGTCCTCTCTGTCCCTGAAGCTTCAAGAAGAAGGGCCATCTCGGCAGTCAGCGTTTCATGCGACCCCAACATGTGGCAGTTCGAATATGAATGAGAGTGCTATCCATGCAGTTTGA 1035 0.5082 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHYAGSGSGSGPIHASGSNNPGSPGDNHDNAATADGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEAADDTPMVQQDFLSANQLQAETEGNNPLPAVPTLDEECESMDSTNSNDGDSAPLKPENSQPPQQQSSYPVLYPAYYSPFFPFPLPYWSGYSPEPNTVKEETHEVLKPTAVHSKAPINVDELVGMSKLSLGETIADSGPSSLSLKLQEEGPSRQSAFHATPTCGSSNMNESAIHAV* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1302 344 Gene3D - 101 153 - -
Ahy11g1302 344 PANTHER TRANSCRIPTION FACTOR KUA1 1 337 - -
Ahy11g1302 344 SMART sant 99 149 IPR001005 -
Ahy11g1302 344 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Ahy11g1302 344 SUPERFAMILY Homeodomain-like 97 152 IPR009057 -
Ahy11g1302 344 MobiDBLite consensus disorder prediction 46 71 - -
Ahy11g1302 344 MobiDBLite consensus disorder prediction 191 237 - -
Ahy11g1302 344 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 98 150 IPR006447 GO:0003677
Ahy11g1302 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 151 IPR017930 -
Ahy11g1302 344 MobiDBLite consensus disorder prediction 46 104 - -
Ahy11g1302 344 CDD SANT 102 147 IPR001005 -
Ahy11g1302 344 PANTHER BNAC01G21010D PROTEIN 1 337 - -
Ahy11g1302 344 ProSiteProfiles Myb-like domain profile. 95 147 IPR001005 -
Ahy11g1302 344 MobiDBLite consensus disorder prediction 1 21 - -
Ahy11g1302 344 ProSiteProfiles SANT domain profile. 103 151 IPR017884 -
Ahy11g1302 344 MobiDBLite consensus disorder prediction 322 344 - -
Ahy11g1302 344 MobiDBLite consensus disorder prediction 207 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1302 Ahy-Chr11 45076986 45082151 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy11g1302 Myb_DNA-binding 1.20E-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1302 - - ccaj:109807943 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1302 11 45076986 45082151 Ahy1g1286 1 37776697 37781851 hybridization