Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1287 ATGCCCAACGCCGTCATCTCCGACGAACTCGTCTCTTCAGCCAGCGTCCAGCCTCGTCGTTGCCGATCCTCTTCTCCTGGATCCCATGCTTCTCCTCGCGTCGCTAGGTCTCGTCGCGGAACGGATAGAGGGTGCTGTCGCCGCTGGGTGGAACTGACCGTGGTGGCATCAAGAATCGTTGCCTCTGGAAGATTAGAAGCATTCAGAGAAGAGAATCCGCCGCAACCTGCTGTTGCCGCCGCGCAAGACGCTTCCCCCTCCATCACGCAAGACGCTGCCTCAATGCTTGGAGCTACTATTTCAGAGACAAATACACCTTACAAATCAAGGAATCAGAAGGATACAATTGAAGTTGGTCCAGGAAACTTGAAACTGATTTATTCCGAGAAGGAAGAAAAACTCACTGAATACATCAACAGCAAAAGCAAGGAAGTAATGGGTCAGGAATTTTCTCATGAGGGAGTTAGTAGCGAGCATATATCATATGATCAGGATGAGCAGGAGGAAGACATGGAAGAGGAAGTTGACGTGGATTATATGGATGAGGACGACTCAAATGTGGAACCAATGTTCGATTATCACGGCTTTGATGAAGGGTATAACATTGACTCACTCAAAGACATTGGGATGATTGAATTTTGGAACATCAAGGACGAAGATGTATGTCATTTTCACATTTTTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAGAGGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCGTGCGGGCGTACTTAAGTTGAAGAATTTTGTATGTCATTGTGAAGGATTTAGACCGCAAAATAATTATGGCATTGAAAACTTTAAGAGAAAACCTACTCCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTCTAGATGCACCTAGTGATCGTTGTGTTGGACAGATATATCGGGCATTAGCGAATCAGGCAGGTGGCTACGAGTATCTCTCTTTCACGCAAAGGAACATGTACAATAAAATAGCAAAGCAAAGGCACCAGTTAGCTGGTGATGCATATGCAGCTTTGAAGGCAGATTACTCATTATTTGGCGATGTGATGGGTTTTGATGCTACCTATAAGAGGAATAAGTATATGTGTCCATTGGTGGTATTTTCTGGTATCAATCATCACAATCAAACAATTATCTTTGCTGCTGTTTTAATTTGCGATGAGGAAAAAGACACATATAGGTGGTTGCTACAACAACTGAAGGTGGCAATGAATGGGAAACCACATGTTTCGGTTATCACGGATGGTGATCTATCAATGAAGTTCGCCATTGAAAAAGAGTTTCCTAATGCACATCATAGATTATATGCATGGCATCTGATTCGCAATGCAACTAGTAACATTGGCAAGCCCCAGTTTACCTCCATGTTTAAAAAGTGTATGCTATGTGACTTTGAAATTGATGTATTTCGTCAAAAGTGGTTTGAAATGGTAGAGGGATTTGGTGTAGAAAACAAGAATTGGGTCCTAGATATGTATAAAAAGAGACATTCATGGGCAACTGCACATATAAGAGGGAAGTTTTTTGCTGGTTTTCGGACTACTTCTCGGTGCGAGGGATTAAACTCAATCATTGCAAAGTATGTCAATTCAAGGCACAATCTGGTTGAGTTCATTCAACGCTTTAATCGATGTGTCGACCATATAAGGTGGAAAGAGGTCCAGGCTGACCTCACATCTGTGAATGGGAGACCCAGTATGCAAACCTATTTTCAACAGTTAGAGAGGAGTGCTGCCAATGTTTACACCCTATCAGTATTTTATATGTTCCAACCAATCTTTGTACAAGCTGCATCAATGAAGGTAATAAATATGAAGCAAACTGGCTCTTATGTGATTTACTCTATCGGTTTGGACCGAATGCCAAATGAGATGTGGCGTGTATTCTGTTGTGACATTGAGATGGAATTCAATTGTTCATGTATAAGAATGGAATCATTTGGCATACCTTGTGAACACATAGTTTGCGTGTTGGTGCATGAAGATATAGAAGAGTTGCCAAGGTCATTAGTCTTGCCTCGGTGGACCAAGACTGCCAAAGTAGGTTTGCAAAATGCAGTCGGATTTCAGTGGGATTCTTTGATGCTAAGTCAATATGGTTGTTTGATGGATTGGTTTAGACAACTAGCCAACTTTGCTTGTCAAGATAACAAGAGATTTATCTTTACACGGGAAATGGCTATGAATTTGTTGAAACAATTTAAGGAGGAAGATGCAGCACAAAAAGAGTTGGTCAATGATGCAGATAGTGTAAGAGATGATGTGCAATGTGGCATGGAGGGCCACAATCGAACAACTTGTCGTGTTCGTCGTGGCATTTCACAGTTAGAAGGCCGTGGAAATGACGCATTTGATAATGACTTGGATGATCACATGAACATTGAAGATGATTCACTAGTATATGATGAGAGTATTTCGTACAATAGCAATGAAGTGCTGTAA 2487 0.4202 MPNAVISDELVSSASVQPRRCRSSSPGSHASPRVARSRRGTDRGCCRRWVELTVVASRIVASGRLEAFREENPPQPAVAAAQDASPSITQDAASMLGATISETNTPYKSRNQKDTIEVGPGNLKLIYSEKEEKLTEYINSKSKEVMGQEFSHEGVSSEHISYDQDEQEEDMEEEVDVDYMDEDDSNVEPMFDYHGFDEGYNIDSLKDIGMIEFWNIKDEDVCHFHIFDVDIAFEFYNRYARTRGFSARKNRTRKSRAGVLKLKNFVCHCEGFRPQNNYGIENFKRKPTPETRCGCSAMMEIRLDAPSDRCVGQIYRALANQAGGYEYLSFTQRNMYNKIAKQRHQLAGDAYAALKADYSLFGDVMGFDATYKRNKYMCPLVVFSGINHHNQTIIFAAVLICDEEKDTYRWLLQQLKVAMNGKPHVSVITDGDLSMKFAIEKEFPNAHHRLYAWHLIRNATSNIGKPQFTSMFKKCMLCDFEIDVFRQKWFEMVEGFGVENKNWVLDMYKKRHSWATAHIRGKFFAGFRTTSRCEGLNSIIAKYVNSRHNLVEFIQRFNRCVDHIRWKEVQADLTSVNGRPSMQTYFQQLERSAANVYTLSVFYMFQPIFVQAASMKVINMKQTGSYVIYSIGLDRMPNEMWRVFCCDIEMEFNCSCIRMESFGIPCEHIVCVLVHEDIEELPRSLVLPRWTKTAKVGLQNAVGFQWDSLMLSQYGCLMDWFRQLANFACQDNKRFIFTREMAMNLLKQFKEEDAAQKELVNDADSVRDDVQCGMEGHNRTTCRVRRGISQLEGRGNDAFDNDLDDHMNIEDDSLVYDESISYNSNEVL* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1287 828 MobiDBLite consensus disorder prediction 1 40 - -
Ahy11g1287 828 ProSiteProfiles Zinc finger SWIM-type profile. 629 677 IPR007527 GO:0008270
Ahy11g1287 828 MobiDBLite consensus disorder prediction 1 31 - -
Ahy11g1287 828 SMART 26again6 652 679 IPR006564 GO:0008270
Ahy11g1287 828 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 230 751 IPR031052 GO:0006355
Ahy11g1287 828 Pfam FAR1 DNA-binding domain 234 307 IPR004330 -
Ahy11g1287 828 PANTHER OS01G0607050 PROTEIN 230 751 - -
Ahy11g1287 828 Pfam MULE transposase domain 364 458 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1287 Ahy-Chr11 44011811 44018404 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy11g1287 MULE 2.30E-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1287 - - ahf:112723376 1207.97