Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1268 ATGGCCAAGTCTTGTTCTAGTGAAAAGAACAATAATAATGGATTGAAGAAGGGTCCATGGACTCCGGAGGAAGATCAAAAACTCATTGATTACATTCAGAAACATGAGCATGGCAAGTGGCGAACCCTTCCTAAGAATGCAGGATTAAAGAGATGTGGAAAAAGTTGCCGGCTAAGGTGGGCTAATTACTTGAGGCCTGATATAAAGAGAGGAAGATTCTCATTTGAAGAAGAAGAAATGATCATCCAGTTACACACTGTTTTGGGAAACAAGTGGTCTACAATTGCTGCTAATTTACCCGGAAGAACAGATAATGAGATTAAGAATTATTGGAACACTCACATCAAGAAGAAATTGTTGAAGATGGGGATTGATCCAATAACTCATAAGCAATCCAAGAGGAAAAGTACCTAA 414 0.3865 MAKSCSSEKNNNNGLKKGPWTPEEDQKLIDYIQKHEHGKWRTLPKNAGLKRCGKSCRLRWANYLRPDIKRGRFSFEEEEMIIQLHTVLGNKWSTIAANLPGRTDNEIKNYWNTHIKKKLLKMGIDPITHKQSKRKST* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1268 137 Pfam Myb-like DNA-binding domain 70 114 IPR001005 -
Ahy11g1268 137 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Ahy11g1268 137 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
Ahy11g1268 137 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Ahy11g1268 137 CDD SANT 72 115 IPR001005 -
Ahy11g1268 137 SMART sant 69 117 IPR001005 -
Ahy11g1268 137 SMART sant 16 66 IPR001005 -
Ahy11g1268 137 CDD SANT 19 64 IPR001005 -
Ahy11g1268 137 Gene3D - 72 137 - -
Ahy11g1268 137 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Ahy11g1268 137 PANTHER TRANSCRIPTION FACTOR MYB30-LIKE 1 131 - -
Ahy11g1268 137 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Ahy11g1268 137 Gene3D - 16 69 - -
Ahy11g1268 137 MobiDBLite consensus disorder prediction 1 22 - -
Ahy11g1268 137 MobiDBLite consensus disorder prediction 1 17 - -
Ahy11g1268 137 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Ahy11g1268 137 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1268 Ahy-Chr11 42317095 42318313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1268 1 129 MYB Transcription Factor Family AT4G21440 82.171 1.57e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy11g1268 Myb_DNA-binding 1.10E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1268 K09422 - aip:107629266 294.278