Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1259 ATGGAATTTAGTTTAAAGCACCAAGTTGGGCTTATGTATGTCATATTACTCTTACCTTCGCTATGTAGCTCACAGGATTCTTTCACTGATTCCAGAGCAACCTATTATGGCAGCCCTGATTGTTATGGCAATCCAAGGGGAGCTTGTGGCTTTGGAGAATATGGAAGGACGGTCAATGATGGCAGTGTTGCAGCGGTGTCTAGGCTATGGAGGAATGGAACTGGCTGTGGTGCATGCTACCAGGCAAGGTGCAAATTAGAGCAATACTGCGACGAGGAGGGAACCTACGTGGTGGTAACAGACTACGGCGAAGGAGACAGAACAGACTTCATTTTGAGCCCACGCGCCTACAAGAAGTTGGGACGAAACGATGAAGCTGCAGCAGAGCTATTCAAATATGGTGTGGTTGACATTGAATACCGAAGGGTCCCTTGCAGATATGAAGGCTACAACATTGTCTTTAAGGTCCATGAACGAAGCAAGAATCCTGAATACTTTGCTGTTGTCATTCTCTATGTTAATGGTGCTTATGATGTAACTGCTGTTCAGTTGTGGCAGGAAGATTGCCAAGAATGGACAGAAATGAGGAGGGTTTATGGGGCAGTGTTTGATTATGCCAACCCACCAAGTGGTGAAATCAATTTGAGGTTCCAAGTGAGTGGCAGTGCAGGTATCTATTGGGTGCAATCCCAGAATGCTATTCCTAGTGATTGGACTGCTGGAGCTGCTTATGATTCACAGGTTCAGCTTACTTAA 756 0.4563 MEFSLKHQVGLMYVILLLPSLCSSQDSFTDSRATYYGSPDCYGNPRGACGFGEYGRTVNDGSVAAVSRLWRNGTGCGACYQARCKLEQYCDEEGTYVVVTDYGEGDRTDFILSPRAYKKLGRNDEAAAELFKYGVVDIEYRRVPCRYEGYNIVFKVHERSKNPEYFAVVILYVNGAYDVTAVQLWQEDCQEWTEMRRVYGAVFDYANPPSGEINLRFQVSGSAGIYWVQSQNAIPSDWTAGAAYDSQVQLT* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1259 251 Gene3D - 19 145 IPR036908 -
Ahy11g1259 251 PANTHER EXPANSIN-B3 4 250 - -
Ahy11g1259 251 Gene3D - 146 247 IPR036749 -
Ahy11g1259 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Ahy11g1259 251 Pfam Lytic transglycolase 64 140 IPR009009 -
Ahy11g1259 251 PANTHER EXPANSIN-B1-LIKE PROTEIN 4 250 - -
Ahy11g1259 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Ahy11g1259 251 Pfam Expansin C-terminal domain 152 235 IPR007117 -
Ahy11g1259 251 SUPERFAMILY PHL pollen allergen 151 246 IPR036749 -
Ahy11g1259 251 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Ahy11g1259 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Ahy11g1259 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Ahy11g1259 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Ahy11g1259 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Ahy11g1259 251 SUPERFAMILY Barwin-like endoglucanases 14 149 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1259 Ahy-Chr11 41832900 41835585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1259 6 251 Expansin Gene Family AT4G17030 61.446 1.07e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1259 - - gmx:100779487 447.973