Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1167 ATGGGAGGGGCATCACTGCCACCTGGATTTCGTTTCCACCCAACAGATGAAGAATTATTGGGATATTACCTAAAAAGAAAAGTGGAAGGGCTTGAAATTGAGCTTGAGGTTATTCCTGTGATTGATTTGTGCAAGTTTGATCCTTGGGAATTGCCTGAGAAATCATTGTTGGCAAATAGAGACATGGAATGGTTCTTCTTTTGTCCAAGGGACCGCAAGTACCCAAATGGATCAAGAACTAACAGAGCCACCAAAGCTGGTTATTGGAAAGCCACTGGAAAAGACAAGAAAGTTGTGTGCCAATTTGATACTCCTTCCACTGTCACAGGATATAGAAAAACCCTTGTCTTCTACCGTGGCAGAGCCCCTTTAGGTGACAGAACTGATTGGCTCATGCATGAGTATCGCCTCGCCGATGATCTCGGCCTATCATCTACATGTTTTCAGGGTGGTTATGCCTTGTGTCGGGTTATTAAGAAGAATGAGAAGGTGAACAATGAGAATGACGCGTCAATGAGATTCTCCAATGAGCCCTTCGCCATTTCTGCTGATGCTTCATCCTCTCAACCAAGTTATTTGAACAATGAGAGTGTTTACTCAAGCCCCAATGCTTCTCCACACAATGTGGACTCTAACCAAGCTTCTATAAACACCAGTTCTTCATCAGAGTTTTGGGTGTCCCCTGATCTGATTCTTGATTCTTCAAAGGACTACCCGCAACTACAAAATACTTTTACAAGGTGTGACATACCAAGTAGTACAATGACACCATGGCTCTCATTGGATCAACCTGAAATTTCATCTAGTTCATCATACTCAAATTTTAATGGGTAA 834 0.4257 MGGASLPPGFRFHPTDEELLGYYLKRKVEGLEIELEVIPVIDLCKFDPWELPEKSLLANRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKVVCQFDTPSTVTGYRKTLVFYRGRAPLGDRTDWLMHEYRLADDLGLSSTCFQGGYALCRVIKKNEKVNNENDASMRFSNEPFAISADASSSQPSYLNNESVYSSPNASPHNVDSNQASINTSSSSEFWVSPDLILDSSKDYPQLQNTFTRCDIPSSTMTPWLSLDQPEISSSSSYSNFNG* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1167 277 MobiDBLite consensus disorder prediction 192 215 - -
Ahy11g1167 277 Gene3D NAC domain 15 166 IPR036093 GO:0003677|GO:0006355
Ahy11g1167 277 Pfam No apical meristem (NAM) protein 7 137 IPR003441 GO:0003677|GO:0006355
Ahy11g1167 277 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 277 - -
Ahy11g1167 277 SUPERFAMILY NAC domain 4 160 IPR036093 GO:0003677|GO:0006355
Ahy11g1167 277 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 277 - -
Ahy11g1167 277 ProSiteProfiles NAC domain profile. 6 160 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1167 Ahy-Chr11 35134944 35137987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1167 1 248 NAC Transcription Factor Family AT4G17980 59.600 3.71e-101 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy11g1167 NAM 2.00E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1167 - - aip:107605232 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1167 11 35134944 35137987 Ahy1g1161 1 29507943 29511198 hybridization