Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1111 ATGGGCACCATCACATCCATTAACGCCTTGCTCTTATTCATGCTATCTACTTTCTTGCTTTTTTACTTCCCATATTTCGCCATCGGCAAAGATGAGGCCGGGCGGCAAAGACAAGCATTGGAGATTATCATAGGACCAGGCGGCCCCGGTTATTATTATCCTGGCCCTGCTCCTTCACCCCAATGTCCCCCTCCTCTTCCTCCTCCTCCTCCCGAACCGGCATGTCCTCCTCCTCTTCCTCCACCGCCGCCGCCACCACCACCACCTCCTCCTCCTCCTCCACCTCCACCTCCACCACCAGCAGCGTGTCCCACATCATCTCCACCTCCGCCGCCGCCTCCACTTCCGACGTGTCCCCCTCCATTACCACCACCACCACCACCTCCTCCACCTACTTGTCCCCCTCCATCACCACCGCCGCGTCCTCCTCCACCACCACCACCACGACCACCACCTCCTCGTCCTCCTCCACAGACACGGTTGATAAGAGCACGAGGAGTACTTCTAAAATTCAAGAAATTTGAAATCGTTGACAAAACAGGGTACACTAATAACTGGAAAGGCTCAGATCCATGCAAGTACAAGGGGATAAGGTGCGCCACATATCCAAACACAAAGGAGAAAGCTGTGGCCGGAATAGACCTCAACCAAGCCAAGATCACCGGTGTTAAAAACGGAACATTGAAGCTTTCCGATGTCTTGGGCGAAATTCCAGAGCTCACATTCTTCCACGTTAACTCTAACGGCTTCGGCGGCAACCTCCCAGACTTATCCGTTAATAAGTTCAAGTATTTCTACGAACTTGACCTCAGCAACAACAAGCTCTCAGGTGCGTTCCCAATACAAGTTCTTCAGGCTACCAATCTAACATTCCTGGACATTAGGTTCAACCAACTCTCCGGCCCAATTCCACCGGAACTCTTCGTCCAAGATCTCGATGTTATCTTCATCAACAATAACTTGTTCTCCGGCAACCTCCCTAGTAATTTCGGCTCAACTCCTGCCAGGTACCTCACGTTCGCCAACAATCAATTTAGCGGCACGATCCCAAGCAGCATTGGTAAAGCTTCGAAGACGCTAACCGAAGTGCTGTTCTTGGGGAACAACCTTGACGGGTGCCTGCCCTACGAGATAGGCTTGCTCGGCAAGGCGACAGTCTTTGATGCGAGCAAAAACATCATTACGGGTCCCATTCCTCACTCTTTCGGATGCTTAAAAAGCATTCAGTTCCTCAACCTTGCAAGCAACCAGCTGTATGGTCCAGTTCCGGAGATCGTCTGCATTCTCCCGGGGCTCCGCAACAACGGCAACTTGTCGTTGTCGGACAACTACTTTACCCAAGTTGGTCCTGAGTGCTTGAAGCTGATAGAGAGCAAGGTTCTTGACGTCAACAATAACTGCATCTTGGGGCTTCCTAATCAAAGATCACCGGAAGAATGCCACATGTTCTTTTCCAATGCGAAACCATGCTCTAACCCCAAATCTTTCCATTACATCCCTTGCAAACCGTACTACTCGCAGTTACACTCCCAAGCCGTGGCGCCGCCGCTGCTTCAAGAAGATAGTTCTTTCTATTCTTCACCGCCTGAGCCGGTAACCTATAAGACTCTCAGACCTCATCGCTTATGA 1629 0.512 MGTITSINALLLFMLSTFLLFYFPYFAIGKDEAGRQRQALEIIIGPGGPGYYYPGPAPSPQCPPPLPPPPPEPACPPPLPPPPPPPPPPPPPPPPPPPPPAACPTSSPPPPPPPLPTCPPPLPPPPPPPPPTCPPPSPPPRPPPPPPPRPPPPRPPPQTRLIRARGVLLKFKKFEIVDKTGYTNNWKGSDPCKYKGIRCATYPNTKEKAVAGIDLNQAKITGVKNGTLKLSDVLGEIPELTFFHVNSNGFGGNLPDLSVNKFKYFYELDLSNNKLSGAFPIQVLQATNLTFLDIRFNQLSGPIPPELFVQDLDVIFINNNLFSGNLPSNFGSTPARYLTFANNQFSGTIPSSIGKASKTLTEVLFLGNNLDGCLPYEIGLLGKATVFDASKNIITGPIPHSFGCLKSIQFLNLASNQLYGPVPEIVCILPGLRNNGNLSLSDNYFTQVGPECLKLIESKVLDVNNNCILGLPNQRSPEECHMFFSNAKPCSNPKSFHYIPCKPYYSQLHSQAVAPPLLQEDSSFYSSPPEPVTYKTLRPHRL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1111 542 PANTHER BNAC05G26270D PROTEIN 16 513 - -
Ahy11g1111 542 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 16 513 - -
Ahy11g1111 542 Gene3D Ribonuclease Inhibitor 163 335 IPR032675 -
Ahy11g1111 542 SUPERFAMILY L domain-like 182 471 - -
Ahy11g1111 542 MobiDBLite consensus disorder prediction 54 115 - -
Ahy11g1111 542 Pfam Leucine rich repeat N-terminal domain 167 199 IPR013210 -
Ahy11g1111 542 Gene3D Ribonuclease Inhibitor 336 492 IPR032675 -
Ahy11g1111 542 PRINTS Proline rich extensin signature 47 59 - -
Ahy11g1111 542 PRINTS Proline rich extensin signature 60 81 - -
Ahy11g1111 542 PRINTS Proline rich extensin signature 99 116 - -
Ahy11g1111 542 PRINTS Proline rich extensin signature 81 97 - -
Ahy11g1111 542 MobiDBLite consensus disorder prediction 127 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1111 Ahy-Chr11 32090120 32092457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1111 160 485 Leucine-rich Repeat extension Gene Families AT4G13340 44.954 4.37e-81 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1111 - - ahf:112800345 768.844