Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1109 ATGGAGAATTATTTGAATGAGAATTTTGGAGGTGTGAAATCCAAGAACTCTGATGGAGAATCTCTTGGTAAATGGAGAAAACTATGTGGGGTGGTCAAGAACCCCAAAAGACGCTTTCGTTTCACTGCCAATCTCTCTAAGCGAGAAGAAGCAGCAGCTATGCGTCGCACTAATCAGGAAAAGCTGAGAGTTGCTGTTTTAGTTTCCAAAGCTGCATTTCAATTTATCCAAGGTGTGCAACTTGGTGATTACACTGTACCACAGCATGTTAAAGCTGCAGGTTTTCAAATAGATGCAGAGGAACTTGGGTCTATAGTTGAAGGACATGACGTAAAGAAGTTGAAATTCCATGGTGGGGTTGAAGGCATTGCAGAAAAGCTTTCAACATCAACAGCCAAGGGTCTTAGTGACGGTTACGAATCGCAGCGTAGGAGAGAGGAGATTTTCGGAGTGAACCAATTCGCTGAAGCTGAACTTCGGAGCTTCTGGGTTTACGTTTTCGAAGCCCTTCATGACATGACACTCATGATTCTTGGAGTGTGTGCCTTTGTGTCGCTGATAGTTGGAATAGCAACAGAGGGATGGCCAAAGGGTGCTCACGATGGTCTAGGAATCGTCGTGAGCATCTTATTGGTGGTCTTTGTAACCGCCACAAGTGACTACCGCCAGTCCTTACAGTTCAAAGATTTAGACAAGGAGAAAAAAAAGATTTCAGTTCAGATAACAAGAAACGGTTACAGGCAGAAAATGTCAATTTACAGTTTACTCCCTGGGGACATGGTCCATCTTGCCATTGGAGACCAAGTCCCTGCCGACGGACTCTTCGTTTCCGGATTCTCCGTCTTGATTGACGAGTCGAGTTTAACCGGCGAGAGCGAACCGGTTATGGTTACTTCTCAGAACCCGTTTCTTCTTTCGGGAACAAAAGTCCAAGATGGATCCTGTACCATGATGGTTACAACGGTGGGAATGAGAACACAGTGGGGGAAGTTAATGGCGACGCTAAGCGAAGGTGGCGATGACGAGACGCCGTTGCAGGTGAAGCTGAATGGAGTGGCAACGATTATAGGAAAGATAGGACTGTTTTTCGCGGTGATTACTTTCGTTGTGTTGGTGAAGGGACTAATGGGGAGAAAACTTGAAGAAGGGAGGTTTTGGTGGTGGTCTACGGAGGATTGCTTGGAGATGCTGGAATTCTTCGCCATTGCAGTTACGATTGTTGTTGTTGCTGTGCCGGAGGGGCTGCCGTTGGCAGTTACGTTGAGCCTTGCGTTTGCGATGAAGAAGATGATGAATGACAAGGCTCTTGTGAGACACTTGGCAGCTTGCGAGACCATGGGATCCGCCACAACTATATGTAGTGACAAGACTGGAACCCTAACAACCAACCGCATGACAGTTGTCAAAACATGCATTTGTATGAAGGTAAACCACGTTAACGAAGTGAGCAACAGTAAGGTGTCTCAACTCCCAGATTTGGCATTAAAGCTGCTACTTCAGTCAATATTCAACAACACCGGCGGTGAAGTTGTGGTTAACAAAATGGGGAAGCGTGAGATTTTGGGAACTCCAACAGAATCAGCGATTCTAGAATTCGGGCTCTCGCTAGGTGGGGACCCACAAGGCGAGAGAGAAAAATGCAAGCTTATAAAAGTTGAGCCATTCAACTCCGAAAAGAAAAGAATGGGCGTGGTTGTGAAGGTCCATGATGGAGGACGCTTAAGAGCACATAGCAAAGGTGCTTCTGAAATAGTGCTTGCATCTTGTGACAAAGTGATAAACTCAAATGGTGAGATTGTGTCCCTTGATGAAGAAGCAATGAACTATCTTAGCAAGACAATAAACCAGTTTGCTAATGAGGCACTTAGGACTCTGTGTCTTGCTTATATGGAATTGGAAAATGGGTTCTCTCCAGAGGATCCTATTCCTTCTTCTGGGTACACTTGTATAGGAGTTGTTGGTATCAAAGATCCCGTTCGTCCGGGTGTTAAGGAATCTGTTGCAGTGTGTCGGTCCGCCGGAATAGTAGTGAGGATGGTCACCGGAGATAACATTAATACGGCAAAGGCTATTGCCAGAGAGTGTGGGATTTTAACAGATGATGGCATCGCCATTGAAGGTCCTGAATTTAGACAAAAAACTCAGGAGGAATTGTTTGAACTCATTCCCAAGCTCCAGGTGATGGCTAGATCCTCACCTTTAGATAAGCATACATTGGTGAAGCAGTTGCGTACAACTTTTGGAGAGGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCCCCAGCCCTTCATGAAGCTGATATTGGACTTGCAATGGGAATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATAATTTTAGACGATAACTTCTCCACAATAGTGACAGTAGCAAAATGGGGACGTTCAGTTTACATAAATATTCAAAAATTTGTACAGTTTCAGCTTACCGTTAATGTGGTAGCATTACTAGTGAACTTCTCATCAGCTTGTTTCACAGGAAGTGCACCACTGACGGCGGTTCAACTTTTGTGGGTGAACATGATAATGGACACATTAGGAGCACTTGCACTTGCAACGGAGCCTCCAAATGATGATTTGATGAAGCGTGCACCTGTTGGAAGGAAAGGAGATTTCATCAGCAATATCATGTGGAGAAATATCTTGGGACAATCAGTGTATCAAGTTGTTGTCATTTGGCTTCTTCAGACTGTGGGAAGATGGTTCTTCTTTCTCTGGGGCCCAAATCCTGATGTTGTCTTAAACACACTTATTTTCAACACATTTGTCTTCTGTCAGGTTTTCAATGAGATAAACTCTCGAGAAATGGAGGAAGTAGATGTGTTGAAGGGCATGTGGGAAAATCAGGTGTTTGTGGCTGTGATTAGTTGCACTGTCGTGTTTCAAATCATAATAGTTGAGTACTTGGGAACCTTTGCAAACACAACACCTCTCTCTTTTGTACAATGGCTCTTTTGTTTAGGGGTTGGGTATATGGGCATGCCAATTGCAGCAAAGTTAAAAGAGATCAATGTTGAATGA 3051 0.4431 MENYLNENFGGVKSKNSDGESLGKWRKLCGVVKNPKRRFRFTANLSKREEAAAMRRTNQEKLRVAVLVSKAAFQFIQGVQLGDYTVPQHVKAAGFQIDAEELGSIVEGHDVKKLKFHGGVEGIAEKLSTSTAKGLSDGYESQRRREEIFGVNQFAEAELRSFWVYVFEALHDMTLMILGVCAFVSLIVGIATEGWPKGAHDGLGIVVSILLVVFVTATSDYRQSLQFKDLDKEKKKISVQITRNGYRQKMSIYSLLPGDMVHLAIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVTSQNPFLLSGTKVQDGSCTMMVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFVVLVKGLMGRKLEEGRFWWWSTEDCLEMLEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMKVNHVNEVSNSKVSQLPDLALKLLLQSIFNNTGGEVVVNKMGKREILGTPTESAILEFGLSLGGDPQGEREKCKLIKVEPFNSEKKRMGVVVKVHDGGRLRAHSKGASEIVLASCDKVINSNGEIVSLDEEAMNYLSKTINQFANEALRTLCLAYMELENGFSPEDPIPSSGYTCIGVVGIKDPVRPGVKESVAVCRSAGIVVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFRQKTQEELFELIPKLQVMARSSPLDKHTLVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACFTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRAPVGRKGDFISNIMWRNILGQSVYQVVVIWLLQTVGRWFFFLWGPNPDVVLNTLIFNTFVFCQVFNEINSREMEEVDVLKGMWENQVFVAVISCTVVFQIIIVEYLGTFANTTPLSFVQWLFCLGVGYMGMPIAAKLKEINVE* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1109 1016 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 109 1015 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Ahy11g1109 1016 PRINTS H+-transporting ATPase (proton pump) signature 610 628 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy11g1109 1016 PRINTS H+-transporting ATPase (proton pump) signature 754 770 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy11g1109 1016 PRINTS H+-transporting ATPase (proton pump) signature 786 811 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy11g1109 1016 Pfam Cation transporting ATPase, C-terminus 839 1007 IPR006068 -
Ahy11g1109 1016 SFLD p-type atpase 435 806 IPR044492 -
Ahy11g1109 1016 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516
Ahy11g1109 1016 Pfam Cation transport ATPase (P-type) 514 592 - -
Ahy11g1109 1016 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 663 IPR023299 GO:0000166
Ahy11g1109 1016 Gene3D - 140 336 - -
Ahy11g1109 1016 PANTHER CALCIUM-TRANSPORTING ATPASE 3 1014 - -
Ahy11g1109 1016 Gene3D - 463 658 IPR023299 GO:0000166
Ahy11g1109 1016 Pfam Cation transporter/ATPase, N-terminus 117 185 IPR004014 -
Ahy11g1109 1016 Pfam E1-E2 ATPase 236 431 - -
Ahy11g1109 1016 Gene3D - 168 1002 - -
Ahy11g1109 1016 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Ahy11g1109 1016 Gene3D - 450 799 IPR023214 -
Ahy11g1109 1016 CDD P-type_ATPase_Ca_PMCA-like 144 887 - -
Ahy11g1109 1016 PANTHER CATION TRANSPORTING ATPASE 3 1014 - -
Ahy11g1109 1016 PRINTS P-type cation-transporting ATPase superfamily signature 778 790 - -
Ahy11g1109 1016 PRINTS P-type cation-transporting ATPase superfamily signature 673 683 - -
Ahy11g1109 1016 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Ahy11g1109 1016 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Ahy11g1109 1016 PRINTS P-type cation-transporting ATPase superfamily signature 651 662 - -
Ahy11g1109 1016 PRINTS P-type cation-transporting ATPase superfamily signature 754 773 - -
Ahy11g1109 1016 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1011 IPR023298 -
Ahy11g1109 1016 SUPERFAMILY HAD-like 451 859 IPR036412 -
Ahy11g1109 1016 SMART Cation_ATPase_N_a_2 114 190 IPR004014 -
Ahy11g1109 1016 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 724 840 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy11g1109 1016 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 386 481 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy11g1109 1016 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 548 699 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy11g1109 1016 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Ahy11g1109 1016 Gene3D - 18 77 - -
Ahy11g1109 1016 SFLD Haloacid Dehalogenase 435 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1109 Ahy-Chr11 31968295 31975166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1109 1 1015 Primary Pumps ATPases AT4G37640 79.901 0.0 1659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1109 K01537 - gmx:100776926 1738.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1109 11 31968295 31975166 Ahy11g1109 11 31968295 31975166 ECH
Ahy11g1109 11 31968295 31975166 Ahy1g1071 1 21106286 21113318 hybridization
Ahy15g0558 15 6862687 6866911 Ahy11g1109 11 31968295 31975166 PCT
Ahy11g1109 11 31968295 31975166 Ahy15g0558 15 6862687 6866911 PCT