Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1103 ATGGATACGCTGTTTAGGCTAGATCCACCGTCCCTAAACTCCACAACAACATCATCAACCAACTCTCATCAAAATTATTATTATTATTATGACCAACACCAACTAGAGGAAGAAGCTGAAGAAGAATGCTTCAACTTTTTCATGGATGAAGAAGACCTATCCTCTTCTTCTTCAAAGCAACCAGAACAATATTACCCTTATTATAACCAATTACAACCCCACTACCATTTATTATCATCCACTACCACTACTCATCATGATTTATCGTCAACATCATTCTTACCACCCACTCCACCACCATCAGATTTCAACTTTGAATTCTCATCAGGCACGTGGGCACCCAACATCCTCCTCGACACCGCACGTGCCATCGCTGACAACAACACCACGCGACTGCATCAACTCCTATGGATGCTCAACGAGCTAAGCTCTCCATACGGCGACACAAACCAAAAACTCGCCGCGTATTTTCTTCAAGCCTTGTTCAGCCGCATAACCACCGTCGGCGAACGAACCTACCGAACCTTAACGTTAGCTTCGGACAAGACTTGCTGTTTCGAGTCCACCAGGAAGACGGTTCTCAAGTTCCAGGAGGTTAGTCCCTGGACCACGTTTGGACACGTGGCGTCCAATGGCGCCATCTTAGAGGCTCTCGATGGGGAGCTCAACTTGCACATTGTGGATTTCAGCAACACGTACTGCACACAGTGGCCAACGCTTCTTGAAGCCTTGGCCACTCGTAGCGACGACACCCCGAACCTCCGGTTAACCACCGTCGTCACCACCAGACCTGGTGACTCTGGCGACGCTGTTCAGAGGGTCATGAAGGAAATAGGTACAAGGATGGAGAAATTTGCGAGGCTAATGGGAGTTCCGTTCAAATTCAACGTCGTTTGCCACGTCGGCGATCTCTCCAATCTCAACTTCGGCGATTTGGACATCAAGAACGAGGAGGCCTTAGCCATCAACTACGTGAACACGCTGCACGCGATCACACCCGTCGGGAACCACCGTGACACGTTGATATCCTCGCTGGCGAGGCTAAACCCTCGGATCGTGACGGTGGTGGAAGAAGAAGCGGATCTGGACGTTGGCGCCGAAGGCCAGGAGTTCCTTACAGGGTTCGAGGAATGCGTGAAGTGGTTTAGGGTTTACATGGAGGCGCTGGATGAGAGCTTTACGAGGACGAGTGGGGAGAGGCTGATGCTGGAGAGGGCGGCGGGGAGGGCGATTGTGGACCTGGTGGCGTGTACGGCGGAGGAGTCGGTGGAGCGGAGGGAGACGGCGGTGAAATGGTCACAGAAAATGAGGGAAGGTGGGGGGTTGAATAGGATGCCGTTTAGCGAGGAGGTGTGTGATGACGTCAGAGCATTGTTGAGAAGGTATAGGGAAGGGTGGTCGATGGCACAGTGTTCCGATAACGGAGTATTTCTTTGTTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAAGCCGTAG 1482 0.5175 MDTLFRLDPPSLNSTTTSSTNSHQNYYYYYDQHQLEEEAEEECFNFFMDEEDLSSSSSKQPEQYYPYYNQLQPHYHLLSSTTTTHHDLSSTSFLPPTPPPSDFNFEFSSGTWAPNILLDTARAIADNNTTRLHQLLWMLNELSSPYGDTNQKLAAYFLQALFSRITTVGERTYRTLTLASDKTCCFESTRKTVLKFQEVSPWTTFGHVASNGAILEALDGELNLHIVDFSNTYCTQWPTLLEALATRSDDTPNLRLTTVVTTRPGDSGDAVQRVMKEIGTRMEKFARLMGVPFKFNVVCHVGDLSNLNFGDLDIKNEEALAINYVNTLHAITPVGNHRDTLISSLARLNPRIVTVVEEEADLDVGAEGQEFLTGFEECVKWFRVYMEALDESFTRTSGERLMLERAAGRAIVDLVACTAEESVERRETAVKWSQKMREGGGLNRMPFSEEVCDDVRALLRRYREGWSMAQCSDNGVFLCWKDQPVVWASAWKP* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1103 493 PANTHER PROTEIN SHORT-ROOT 1 492 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Ahy11g1103 493 Pfam GRAS domain family 116 492 IPR005202 -
Ahy11g1103 493 ProSiteProfiles GRAS family profile. 104 492 IPR005202 -
Ahy11g1103 493 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 492 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1103 Ahy-Chr11 31600649 31603214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1103 26 493 GRAS Transcription Factor Family AT4G37650 59.839 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy11g1103 GRAS 3.90E-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1103 - - gmx:100778524 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1103 11 31600649 31603214 Ahy11g1103 11 31600649 31603214 ECH
Ahy11g1103 11 31600649 31603214 Ahy1g1078 1 21358302 21360796 hybridization
Ahy15g0550 15 6796876 6799019 Ahy11g1103 11 31600649 31603214 PCT
Ahy11g1103 11 31600649 31603214 Ahy15g0550 15 6796876 6799019 PCT