Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1096 ATGTCTGTCTCCCCAAAACACTCAGCTTGTACTCTTCTTGACTTGCACTGCAATGAAGCAACAAGCGATGTGGTGTACTTGGATTCCAACATTCACAGCAACTATGAATTCGACGATGCTGGTTCGAACAATGCTCTTCTATGGAGCGACTCTGGTAGTGTCGATGAAGAAGACCGTCTCTTAAGCTTGTTAGACTCTGAACTTGATCAAGTTCAGGAAAGAACAAGGTCTCTAATACAACTTCGCAAGACTAAGTGGCTGCGCAATGCGCGAGAAGAAGCCATAAATTGGATCCTAAAGGTATGTGCATACTACAGTTTTAGACCTGAGACGGCATATCTTTCTGCAATTTATCTTGATCGTTTCCTTTTGTCGCACACATTGAAGCAAGATAAAACATGGCCTCTGCAGCTGCTATCAGTTGCATGCCTTTCGCTCGCAGCGAAAATGGAAGAAACCAAGGTGCCTCTGCTATTGGACCTACAAATGGTTGAGCCAAGGTTCTTGTTTAGGCCGAAAACAGTTCAGAGGATGGAGCTTCTGGTTATGGCAACTCTCAAGTGGCAACTCCGAGTTATAACAAAGCCTTTCGATTTTGCTCATCTTTTCATTCTTAGACTTTCTTGTTCTTCAGCTTCCACATTAGGAGATTTAAATTATCTTGCTTCTCGTGTGTCTGATGTTATCTTTAAAACATGTTTAGTTATGGATTTCTTGGAGTTTTCACCTTCCACAATAGCAGCAGCGGCTCTGTTATATGTAACAGATCAATATGTTGATGACCTTAAACTACATGGCTTCCACAAGAATATAAGAATTGATATGGTGCAGAAATGTCACAACCTTATGAAGCAGACAATTCAGAGATCGGAATATATTTTGCCAAAGACTACTCTTCAGTTAATGCCCCCAAGTCCAACTTGTGTGCTTGATCTTGCAGATATGCAAGATAATCATAGTGCTACTCACAAATGA 975 0.4123 MSVSPKHSACTLLDLHCNEATSDVVYLDSNIHSNYEFDDAGSNNALLWSDSGSVDEEDRLLSLLDSELDQVQERTRSLIQLRKTKWLRNAREEAINWILKVCAYYSFRPETAYLSAIYLDRFLLSHTLKQDKTWPLQLLSVACLSLAAKMEETKVPLLLDLQMVEPRFLFRPKTVQRMELLVMATLKWQLRVITKPFDFAHLFILRLSCSSASTLGDLNYLASRVSDVIFKTCLVMDFLEFSPSTIAAAALLYVTDQYVDDLKLHGFHKNIRIDMVQKCHNLMKQTIQRSEYILPKTTLQLMPPSPTCVLDLADMQDNHSATHK* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1096 324 Pfam Cyclin, N-terminal domain 75 190 IPR006671 -
Ahy11g1096 324 SMART cyclin_7 96 184 IPR013763 -
Ahy11g1096 324 SUPERFAMILY Cyclin-like 57 190 IPR036915 -
Ahy11g1096 324 SUPERFAMILY Cyclin-like 175 283 IPR036915 -
Ahy11g1096 324 PANTHER CYCLINS 18 317 IPR039361 -
Ahy11g1096 324 Coils Coil 54 74 - -
Ahy11g1096 324 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 18 317 - -
Ahy11g1096 324 CDD CYCLIN 91 183 IPR013763 -
Ahy11g1096 324 Gene3D - 192 268 - -
Ahy11g1096 324 Gene3D - 75 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1096 Ahy-Chr11 31103671 31105903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1096 13 301 Core Cell Cycle Gene Families AT1G70210 36.789 1.44e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1096 K18810 - gmx:100799323 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1096 11 31103671 31105903 Ahy11g1096 11 31103671 31105903 ECH
Ahy11g1096 11 31103671 31105903 Ahy1g1086 1 21720565 21722768 hybridization