Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1084 ATGCTTTCCACTCTCCCTTCTTCCGATCCTCTTCTTCCAAATCCGTTCTCAGCCGCCGGCTATGCCAACGGTTGTTTCAGCCTTTGGGACTGCCCGGACCTTTTTACCTGCTCTAGACCAACCAATAGTCCTAAGCCCGTTACTTCGAGTTCCGGTTCTGATGAACCAAACCAACCCACCGACGAACCGGATCGGTCCCTTGACGAAAAACCGGCCAGACCGTACCGTGACATGGTTATTGACGAACGGAAGCGCCGGCGCATGTTATCGAACCGGGAATCAGCCCGGAGGTCGCGGATGCGCAAGCAGAGGCACCTAGAGAACCTACGGAACCAGTTGAACAAGTGTCGGGTCGAAAACCGGGAACTTAACAACCGGTTGCAGTTCATCGTTCATCACTTGAACCGGATCCGAACCGAAAACCAGTGGCTCCGGTCGGAAAGAACCGTGTTGTGGCAAAAACTGTCCGACTTTACTCAAATCTTGGTTTTCCAAGAATTGCATCCTTTGGATCATATTTCTAACATCCCCTGCATGGTGGCCATGCAATAG 552 0.5217 MLSTLPSSDPLLPNPFSAAGYANGCFSLWDCPDLFTCSRPTNSPKPVTSSSGSDEPNQPTDEPDRSLDEKPARPYRDMVIDERKRRRMLSNRESARRSRMRKQRHLENLRNQLNKCRVENRELNNRLQFIVHHLNRIRTENQWLRSERTVLWQKLSDFTQILVFQELHPLDHISNIPCMVAMQ* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1084 183 MobiDBLite consensus disorder prediction 42 57 - -
Ahy11g1084 183 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Ahy11g1084 183 SUPERFAMILY Leucine zipper domain 83 133 IPR046347 GO:0003700|GO:0006355
Ahy11g1084 183 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Ahy11g1084 183 Gene3D - 81 157 - -
Ahy11g1084 183 PANTHER BNACNNG60880D PROTEIN 31 179 - -
Ahy11g1084 183 MobiDBLite consensus disorder prediction 42 102 - -
Ahy11g1084 183 MobiDBLite consensus disorder prediction 58 96 - -
Ahy11g1084 183 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Ahy11g1084 183 PANTHER BZIP TRANSCRIPTION FACTOR 44 31 179 - -
Ahy11g1084 183 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Ahy11g1084 183 Coils Coil 92 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1084 Ahy-Chr11 30171199 30172300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1084 25 166 bZIP Transcription Factor Family AT3G49760 36.913 7.35e-25 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy11g1084 bZIP_Maf 0.00042 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1084 - - ahf:112800711 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1084 11 30171199 30172300 Ahy1g1099 1 22404888 22406098 hybridization
Ahy15g0529 15 6517345 6518281 Ahy11g1084 11 30171199 30172300 PCT
Ahy11g1084 11 30171199 30172300 Ahy15g0529 15 6517345 6518281 PCT