Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy11g1078 | ATGAAGAGTATAGTGGAAAATGATGATGGCGGTGTTGAGCTTAATAATGAAAACAACTGGTTGGGGTTTTCACTCTCTTCTCCACACCATCATGTTGATTCTTCTTCTTCCTCCTCTGCTGCTTCTGTTCCTCCAACAAGCTTCTACATGAACCACCATGCTTCTCATCTTAGCAGCTATGGATTCTACTACGGAATTGAACCTGACAACAATAATAATAACGTTAGCCTGTATTCTGGTTTTCCAGTTATGCCCCTCAAATCTGATGGCACTCTCTACGGAATGGACCCTCTAATCAACAGGGCACACCCACAACAAGTGATTGGTTCAAGTTCAACGCCAAAACTGGAGAATTTGTTAGGTGGCGGCGATTTGATGGAGACACCTCATCACTATGAATGTAGTGTAGCGGAAGCAATGCCTCTCAGCCTGGACACCATTTTTCATAGAAACAACCACCAACCACACTTGTCATACTACCATGGGCTTCTAGAAGGTTCCAACAAGCAAAGTACGCAAGCTTCAGACACCAACGACAACAATCTCAAGAACTGGGGGGTGATTGAGGTGAATAATGGAGGTGGTGAATTATTAGGAGCTTCTTCAATTGGAACAATGAGTTATGGGGGGGACTTGCAGTCTTTGAGCTTGTCAATGAGTCCGAGCTCGCAATCGAGCTGCGTCACGAGTTCGCAGCAGCGTGTGAGTGTCAATGGCATTGATTCCATTGTTGGCAGCATGGATGCAACAAAGAAGAGGGGTTCTGAAAAGGTTCAACAGAAGCATATTGTTCATAGAAAATCCATTGACACGTTTGGGCAAAGAACCTCACAGTATAGAGGTGTAACAAGGCATAGATGGACTGGTAGATATGAAGCACATCTATGGGACAATAGCTGCAAGAAAGAAGGCCAAAGTAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATATGGCGGCACTCAAGTACTGGGGACCCTCCACACACATTAACTTCCCTTTGGAAAATTATCAAAATCAACTTGAGGAAATGAAGAACATGACCAGACAAGAATATGTTGCTCATTTAAGAAGAAAAAGCAGCGGATTCTCAAGGGGAGCTTCAATGTACAGAGGAGTAACTAGACATCACCAACATGGAAGGTGGCAAGCTCGAATTGGAAGGGTAGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGCACACAAGAGGAAGCAGCAGAAGCTTATGATATTGCAGCCATAAAATTCAGAGGGGTTAATGCCGTAACAAACTTTGACATAACAAGATATGATGTCGAAAAAATCATGGCAAGCAACAACCTTCTAAGCAGTGAGCTAGCACGGCGGAACAAAGAGGTTCTTGTTGGCAGAGCCGGTGAGTTTAGTAACAACCTTGATAACCAAAGCCAAGAATCGATTCTAATGCAAATCAGCCAGAGCCAGCCAAGACTGGAGGCAATAGACAATATGTTTTTTCAAGAAGTGGAGGATCCGAGCAAGATTTATGCGCATTTGCATAATGCGCATGCATCGAATCCTTCTTCGCTTGCAACAAGCTTGAACAGCTCAAGAGAAGGTAGCCCTGAAAACAGGACAAGCTTGCCAATGCTCTCTGCCGGAGGAGTAGCTTCTACCAAGCTATTGGCAGCCGCGGCAACTATTCCGGTGCTTTCTTTGCCTCAGATGCCGGTTTTTGCTGCTTGGACAGATGCATAG | 1752 | 0.4446 | MKSIVENDDGGVELNNENNWLGFSLSSPHHHVDSSSSSSAASVPPTSFYMNHHASHLSSYGFYYGIEPDNNNNNVSLYSGFPVMPLKSDGTLYGMDPLINRAHPQQVIGSSSTPKLENLLGGGDLMETPHHYECSVAEAMPLSLDTIFHRNNHQPHLSYYHGLLEGSNKQSTQASDTNDNNLKNWGVIEVNNGGGELLGASSIGTMSYGGDLQSLSLSMSPSSQSSCVTSSQQRVSVNGIDSIVGSMDATKKRGSEKVQQKHIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDMAALKYWGPSTHINFPLENYQNQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASNNLLSSELARRNKEVLVGRAGEFSNNLDNQSQESILMQISQSQPRLEAIDNMFFQEVEDPSKIYAHLHNAHASNPSSLATSLNSSREGSPENRTSLPMLSAGGVASTKLLAAAATIPVLSLPQMPVFAAWTDA* | 584 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy11g1078 | 583 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 16 | 169 | - | - | |
Ahy11g1078 | 583 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 179 | 581 | - | - | |
Ahy11g1078 | 583 | PRINTS | Ethylene responsive element binding protein signature | 420 | 440 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | PRINTS | Ethylene responsive element binding protein signature | 279 | 290 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | Pfam | AP2 domain | 278 | 336 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | Pfam | AP2 domain | 381 | 430 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | SUPERFAMILY | DNA-binding domain | 379 | 439 | IPR016177 | GO:0003677 | |
Ahy11g1078 | 583 | MobiDBLite | consensus disorder prediction | 525 | 548 | - | - | |
Ahy11g1078 | 583 | SUPERFAMILY | DNA-binding domain | 277 | 346 | IPR016177 | GO:0003677 | |
Ahy11g1078 | 583 | Gene3D | AP2/ERF domain | 380 | 440 | IPR036955 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | Gene3D | AP2/ERF domain | 277 | 346 | IPR036955 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | ProSiteProfiles | AP2/ERF domain profile. | 278 | 344 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT | 179 | 581 | - | - | |
Ahy11g1078 | 583 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT | 16 | 169 | - | - | |
Ahy11g1078 | 583 | SMART | rav1_2 | 278 | 350 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | SMART | rav1_2 | 380 | 444 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | CDD | AP2 | 379 | 440 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | ProSiteProfiles | AP2/ERF domain profile. | 380 | 438 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy11g1078 | 583 | CDD | AP2 | 277 | 344 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy11g1078 | Ahy-Chr11 | 29752022 | 29757730 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy11g1078 | 1 | 583 | AP2-EREBP Transcription Factor Family | AT4G37750 | 48.878 | 2.17e-168 | 488 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Ahy11g1078 | AP2 | 2.10E-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy11g1078 | K09285 | - | gmx:100787611 | 637.876 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g1078 | 11 | 29752022 | 29757730 | Ahy1g1103 | 1 | 22752482 | 22758063 | hybridization | |
Ahy15g0528 | 15 | 6507264 | 6510483 | Ahy11g1078 | 11 | 29752022 | 29757730 | PCT | |
Ahy11g1078 | 11 | 29752022 | 29757730 | Ahy15g0528 | 15 | 6507264 | 6510483 | PCT |