Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1078 ATGAAGAGTATAGTGGAAAATGATGATGGCGGTGTTGAGCTTAATAATGAAAACAACTGGTTGGGGTTTTCACTCTCTTCTCCACACCATCATGTTGATTCTTCTTCTTCCTCCTCTGCTGCTTCTGTTCCTCCAACAAGCTTCTACATGAACCACCATGCTTCTCATCTTAGCAGCTATGGATTCTACTACGGAATTGAACCTGACAACAATAATAATAACGTTAGCCTGTATTCTGGTTTTCCAGTTATGCCCCTCAAATCTGATGGCACTCTCTACGGAATGGACCCTCTAATCAACAGGGCACACCCACAACAAGTGATTGGTTCAAGTTCAACGCCAAAACTGGAGAATTTGTTAGGTGGCGGCGATTTGATGGAGACACCTCATCACTATGAATGTAGTGTAGCGGAAGCAATGCCTCTCAGCCTGGACACCATTTTTCATAGAAACAACCACCAACCACACTTGTCATACTACCATGGGCTTCTAGAAGGTTCCAACAAGCAAAGTACGCAAGCTTCAGACACCAACGACAACAATCTCAAGAACTGGGGGGTGATTGAGGTGAATAATGGAGGTGGTGAATTATTAGGAGCTTCTTCAATTGGAACAATGAGTTATGGGGGGGACTTGCAGTCTTTGAGCTTGTCAATGAGTCCGAGCTCGCAATCGAGCTGCGTCACGAGTTCGCAGCAGCGTGTGAGTGTCAATGGCATTGATTCCATTGTTGGCAGCATGGATGCAACAAAGAAGAGGGGTTCTGAAAAGGTTCAACAGAAGCATATTGTTCATAGAAAATCCATTGACACGTTTGGGCAAAGAACCTCACAGTATAGAGGTGTAACAAGGCATAGATGGACTGGTAGATATGAAGCACATCTATGGGACAATAGCTGCAAGAAAGAAGGCCAAAGTAGGAAAGGAAGGCAAGTTTATCTAGGGGGTTATGATATGGAAGAAAAAGCTGCGAGAGCTTATGATATGGCGGCACTCAAGTACTGGGGACCCTCCACACACATTAACTTCCCTTTGGAAAATTATCAAAATCAACTTGAGGAAATGAAGAACATGACCAGACAAGAATATGTTGCTCATTTAAGAAGAAAAAGCAGCGGATTCTCAAGGGGAGCTTCAATGTACAGAGGAGTAACTAGACATCACCAACATGGAAGGTGGCAAGCTCGAATTGGAAGGGTAGCTGGAAACAAAGATCTATATCTTGGAACCTTCAGCACACAAGAGGAAGCAGCAGAAGCTTATGATATTGCAGCCATAAAATTCAGAGGGGTTAATGCCGTAACAAACTTTGACATAACAAGATATGATGTCGAAAAAATCATGGCAAGCAACAACCTTCTAAGCAGTGAGCTAGCACGGCGGAACAAAGAGGTTCTTGTTGGCAGAGCCGGTGAGTTTAGTAACAACCTTGATAACCAAAGCCAAGAATCGATTCTAATGCAAATCAGCCAGAGCCAGCCAAGACTGGAGGCAATAGACAATATGTTTTTTCAAGAAGTGGAGGATCCGAGCAAGATTTATGCGCATTTGCATAATGCGCATGCATCGAATCCTTCTTCGCTTGCAACAAGCTTGAACAGCTCAAGAGAAGGTAGCCCTGAAAACAGGACAAGCTTGCCAATGCTCTCTGCCGGAGGAGTAGCTTCTACCAAGCTATTGGCAGCCGCGGCAACTATTCCGGTGCTTTCTTTGCCTCAGATGCCGGTTTTTGCTGCTTGGACAGATGCATAG 1752 0.4446 MKSIVENDDGGVELNNENNWLGFSLSSPHHHVDSSSSSSAASVPPTSFYMNHHASHLSSYGFYYGIEPDNNNNNVSLYSGFPVMPLKSDGTLYGMDPLINRAHPQQVIGSSSTPKLENLLGGGDLMETPHHYECSVAEAMPLSLDTIFHRNNHQPHLSYYHGLLEGSNKQSTQASDTNDNNLKNWGVIEVNNGGGELLGASSIGTMSYGGDLQSLSLSMSPSSQSSCVTSSQQRVSVNGIDSIVGSMDATKKRGSEKVQQKHIVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQVYLGGYDMEEKAARAYDMAALKYWGPSTHINFPLENYQNQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDITRYDVEKIMASNNLLSSELARRNKEVLVGRAGEFSNNLDNQSQESILMQISQSQPRLEAIDNMFFQEVEDPSKIYAHLHNAHASNPSSLATSLNSSREGSPENRTSLPMLSAGGVASTKLLAAAATIPVLSLPQMPVFAAWTDA* 584
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1078 583 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 169 - -
Ahy11g1078 583 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 179 581 - -
Ahy11g1078 583 PRINTS Ethylene responsive element binding protein signature 420 440 IPR001471 GO:0003700|GO:0006355
Ahy11g1078 583 PRINTS Ethylene responsive element binding protein signature 279 290 IPR001471 GO:0003700|GO:0006355
Ahy11g1078 583 Pfam AP2 domain 278 336 IPR001471 GO:0003700|GO:0006355
Ahy11g1078 583 Pfam AP2 domain 381 430 IPR001471 GO:0003700|GO:0006355
Ahy11g1078 583 SUPERFAMILY DNA-binding domain 379 439 IPR016177 GO:0003677
Ahy11g1078 583 MobiDBLite consensus disorder prediction 525 548 - -
Ahy11g1078 583 SUPERFAMILY DNA-binding domain 277 346 IPR016177 GO:0003677
Ahy11g1078 583 Gene3D AP2/ERF domain 380 440 IPR036955 GO:0003700|GO:0006355
Ahy11g1078 583 Gene3D AP2/ERF domain 277 346 IPR036955 GO:0003700|GO:0006355
Ahy11g1078 583 ProSiteProfiles AP2/ERF domain profile. 278 344 IPR001471 GO:0003700|GO:0006355
Ahy11g1078 583 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 179 581 - -
Ahy11g1078 583 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 16 169 - -
Ahy11g1078 583 SMART rav1_2 278 350 IPR001471 GO:0003700|GO:0006355
Ahy11g1078 583 SMART rav1_2 380 444 IPR001471 GO:0003700|GO:0006355
Ahy11g1078 583 CDD AP2 379 440 IPR001471 GO:0003700|GO:0006355
Ahy11g1078 583 ProSiteProfiles AP2/ERF domain profile. 380 438 IPR001471 GO:0003700|GO:0006355
Ahy11g1078 583 CDD AP2 277 344 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy11g1078 Ahy-Chr11 29752022 29757730 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1078 1 583 AP2-EREBP Transcription Factor Family AT4G37750 48.878 2.17e-168 488
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Ahy11g1078 AP2 2.10E-13 CL0081
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1078 K09285 - gmx:100787611 637.876
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1078 11 29752022 29757730 Ahy1g1103 1 22752482 22758063 hybridization
Ahy15g0528 15 6507264 6510483 Ahy11g1078 11 29752022 29757730 PCT
Ahy11g1078 11 29752022 29757730 Ahy15g0528 15 6507264 6510483 PCT