Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1066 ATGGGTCTTCATCATGATTCTACTCATAATAATAACAACATAGGCCTTCATCTTGTTCTAGGGTTGGCTCTGAGTTCCTCCTCTGATTCACCAACACAAGAAACCATAACTACCTCTACTAAGATCCCGCCGTACTCCTCTTCCTCCACCGTAACAACCGATGATGCTGAATTACTATTACCATCTCTTACTTTAGCTCTCTCCGGTCACGATGTGAACAAAAACAAAAACGATGATACGCAAGAGCACCATAGGGTCCAGGTAGTCCCTACCAAGGCTAACAACAATAAGGTCTACAGTAGTGAAGACTACCCTTCTACTGGTGACGTGTCGGCACAGAATTCGCCTCACCACAGCGCCGTTTCGTCTTTCTCCAGCGGCTGCAGAAGAGGAGTCAAGAGGGAGAGGGATGTTAGCGCTAGCGACGAAGCCGAGGCGGAGGCCACGGAGATTGAGAGGCTTTCGTCGCGAATCAGCGACGAAGAGGAAGACGGTGGCACCACCGCCTCCGCCGCTGCCAGGAAGAAGCTTAGGCTCACCAAAGAACAATCTGCTCTGTTGGAAGACAGCTTCAAACAACATAGCACTCTCAATCCTAAGCAGAAGCAAGCTTTAGCGAAGCAATTGAATCTACGGCCTCGACAAGTTGAAGTGTGGTTCCAGAACCGGAGAGCCAGGTTATGTTGTTGTAACAGAACAAAGCTGAAGCAGACGGAGGTAGATTGCGAGTTCCTAAAGAAGTGTTGTGAGACACTAACAGATGAGAACAGAAGGCTACAGAAAGAGCTTCAAGAGCTTAAGGCACTCAAACTGTCTCAGCCTTTGTACATGCCTCCCATGCCCGCCGCGACACTCACCATCTGCCCTTCTTGCGACCGGGCCGTTGCCATTGGCAGCGGTGGCAGCGCTTCCAATAACATCAAGAATACTCCTTTGATCTCCTTGGCCCCCAAGCCTCACCACTTCTTTAGTCCCTTCACCAATCCTTCCGCAGCATGTTGA 1002 0.5 MGLHHDSTHNNNNIGLHLVLGLALSSSSDSPTQETITTSTKIPPYSSSSTVTTDDAELLLPSLTLALSGHDVNKNKNDDTQEHHRVQVVPTKANNNKVYSSEDYPSTGDVSAQNSPHHSAVSSFSSGCRRGVKRERDVSASDEAEAEATEIERLSSRISDEEEDGGTTASAAARKKLRLTKEQSALLEDSFKQHSTLNPKQKQALAKQLNLRPRQVEVWFQNRRARLCCCNRTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKALKLSQPLYMPPMPAATLTICPSCDRAVAIGSGGSASNNIKNTPLISLAPKPHHFFSPFTNPSAAC* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1066 333 SMART halz 236 279 IPR003106 GO:0006355|GO:0043565
Ahy11g1066 333 Coils Coil 242 272 - -
Ahy11g1066 333 PANTHER - 16 333 - -
Ahy11g1066 333 MobiDBLite consensus disorder prediction 129 170 - -
Ahy11g1066 333 MobiDBLite consensus disorder prediction 26 48 - -
Ahy11g1066 333 Pfam Homeobox associated leucine zipper 236 270 IPR003106 GO:0006355|GO:0043565
Ahy11g1066 333 MobiDBLite consensus disorder prediction 92 170 - -
Ahy11g1066 333 ProSiteProfiles 'Homeobox' domain profile. 170 226 IPR001356 GO:0003677
Ahy11g1066 333 MobiDBLite consensus disorder prediction 92 126 - -
Ahy11g1066 333 CDD homeodomain 174 227 IPR001356 GO:0003677
Ahy11g1066 333 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9 16 333 - -
Ahy11g1066 333 Pfam Homeodomain 174 226 IPR001356 GO:0003677
Ahy11g1066 333 Gene3D - 180 227 - -
Ahy11g1066 333 Coils Coil 144 164 - -
Ahy11g1066 333 SMART HOX_1 172 234 IPR001356 GO:0003677
Ahy11g1066 333 SUPERFAMILY Homeodomain-like 164 227 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1066 Ahy-Chr11 28511225 28514485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1066 18 333 Homeobox Transcription Factor Family AT4G37790 54.062 1.43e-80 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy11g1066 Homeodomain 4.30E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1066 K09338 - gmx:100795135 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1066 11 28511225 28514485 Ahy1g1111 1 23515993 23518917 hybridization
Ahy5g0514 5 6247561 6249003 Ahy11g1066 11 28511225 28514485 PCT
Ahy11g1066 11 28511225 28514485 Ahy5g0514 5 6247561 6249003 PCT