Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1065 ATGATGAGGCTGAAGACATATGCCGGTCTCAGTTTGATTGCAACCCTGGCTATCACATATCATGCATTTAACAGTAGAGGCCAGTTTTATCCGGCAATGGTGTATCTTTCAACTTCCAAGATCAGCTTAGTGCTTCTTCTCAACATGGGTTTGGTTATTATGTGTATTCTATGGCAGTTGACTAAAAAGGTATTCCTGGGTTCTCTTAGAGAAGCTGAGGTAGAAAGGCTTAACGAGCAATCGTGGAGGGAGGTTATGGAAATCCTCTTTGCCATTACTATTTTTAGGCAGGATTTCTCAGTTACGTTTCTTGCGATGGTCACAGCGCTATTGTTGATTAAAGCTTTGCATTGGTTGGCTCAAAAGAGGGTTGAGTACATTGAGACAACTCCTACGGTGCCCATGTTGTCCCATGTTCGGATTGTATCTTTTATGGGTTTCCTCCTTCTCCTCGATAGCCTATTCTTATACAGTAATCTGAAGCATCTGCTACAAACATGGCAACCGTCAGTTTCGATATTCTTCTCTTTTGAGTACATGATACTGGCAACGACAACAGTGTCGATTTTTGTAAAATATCTTTTCTATGTTAGTGACATGCTCATGGAAGGACAATGGGAAAGGAAACCAGTCTTCACATTCTACTTGGAACTTATCAGGGACTTGCTTCACTTGTCTATGTATCTGTGCTTCTTCCTCGTAATTTTTGTAAACTATGGTGTTCCTTTGCACTTAATACGGGAGCTCTATGAGACATTTAGGAACTTCAAAGTCCGTGTTGCAGATTACATACGATATCGTAAGATCACTTCAAATATGAACGACCGTTTTCCAGATGCAACGCCTGAAGAGCTTAATGCAAGTGATGCAACTTGCATTATCTGTCGTGAAGAGATGACTACTGCCAAGAAACTTATATGTGGACATTTGTTTCATGTTCATTGCCTCCGATCATGGTTGGAGCGGCAACATACTTGCCCTACCTGCAGAGCCCTGGTTGTTCCCCCAGAAAATGGGGCAACAGCAACTGTAGGCCAGCAAGGAGCACAACCAGATGGTCATCGACAGGGGACTAGCACTGGAAGCACAGCTCAAAATGAGGTTGGCAGTGGTGGGGCAATTGATAATTTGAGTCAGCATCAAGCCCGACTTCAAGCTGCAGCTGCAGCAGCAGCTTCAATATATGAGAAGTCTTATGTTTATCCCTCCCCAACATCTTTAGTGTGCTCTCCTGGGTACACTCTTCAACCCCCAGTTCAGATGTCTATGGGCAAATCTGTTAACACGGCACTCAATGGAGAACAAGCTTCTGGTGAACAGGCACAACAGCAATTTGTTCTCCCTGGTGGACCAATGATATCCTTTCCTCAAATGGGGCCCTTCCATTTTCTTCCTTCCCAAACACGCGGAGCCCCTGCGAATTATGGAGTGGAGTTTGGAGTTGACCCAAATATGCCAAGCTCTCACCTGGAAGCTCATAGAAAACTACTTCAATATCAGATTGAGATTCTGCAAAATCAGCTCAAGCTTTTGCAGAGGACAAAGGTTGAAACAGGTGTAGATGAGGGTACATCTTCATCATCCACATCGACAGCAGATAGCAGAGGCAAGCAAATAGCATCGAGTCATGAGATTCATCGTGAAAAAGAATAA 1653 0.4374 MMRLKTYAGLSLIATLAITYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQLTKKVFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLAQKRVEYIETTPTVPMLSHVRIVSFMGFLLLLDSLFLYSNLKHLLQTWQPSVSIFFSFEYMILATTTVSIFVKYLFYVSDMLMEGQWERKPVFTFYLELIRDLLHLSMYLCFFLVIFVNYGVPLHLIRELYETFRNFKVRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGATATVGQQGAQPDGHRQGTSTGSTAQNEVGSGGAIDNLSQHQARLQAAAAAAASIYEKSYVYPSPTSLVCSPGYTLQPPVQMSMGKSVNTALNGEQASGEQAQQQFVLPGGPMISFPQMGPFHFLPSQTRGAPANYGVEFGVDPNMPSSHLEAHRKLLQYQIEILQNQLKLLQRTKVETGVDEGTSSSSTSTADSRGKQIASSHEIHREKE* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1065 550 Pfam Ring finger domain 291 330 IPR001841 -
Ahy11g1065 550 PANTHER - 1 466 - -
Ahy11g1065 550 PANTHER RING ZINC FINGER PROTEIN 1 466 - -
Ahy11g1065 550 SMART ring_2 292 329 IPR001841 -
Ahy11g1065 550 SUPERFAMILY RING/U-box 272 336 - -
Ahy11g1065 550 MobiDBLite consensus disorder prediction 518 550 - -
Ahy11g1065 550 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 337 IPR013083 -
Ahy11g1065 550 ProSiteProfiles Zinc finger RING-type profile. 292 330 IPR001841 -
Ahy11g1065 550 Coils Coil 494 514 - -
Ahy11g1065 550 MobiDBLite consensus disorder prediction 340 373 - -
Ahy11g1065 550 CDD RING-H2_synoviolin 289 330 - -
Ahy11g1065 550 MobiDBLite consensus disorder prediction 518 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1065 Ahy-Chr11 28066205 28071063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1065 1 544 C3H Transcription Factor Family AT3G16090 63.736 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1065 K10601 - gmx:100816441 843.188