Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1059 ATGGGCGCAACGGTGGTTATTCCTCCTGCAACCAGCGTCCATGAGTTGCTTGAATGTCCCGTTTGCACCAATTCAATGTATCCCCCAATTCATCAGGATTCCCCTGTATTCAGTTTTATCAACAGTTTGTCGCCTATAAAGCCCGTGAAGTCTGCCCAGATTGGTCAAACATTTAGCTCGCTTAGCTTTCCTTCCCCTCCGCGTGCTTTTACTTCATCCAATCTCACCTGTTTCAAGGAATCAAAAGTTCTCAGGAGGCATAACCCTTTTGGGGCATCAAGGCCTGGGTTGTCATCTGAAGATGGTAATAAATTTCAGACAAGTGAAGAGGCTATTGCAGATTCATTTCATCCATATCATAACTCGAGGGAATCTCAGGGAAATTTTCATGATGGAATATCTGTAGTTGATGATTCGATTGCTCTACCTGGTGAGCACACAGACTTCTCAGCTGAGATACTGCAGGCCTTAAATTATAATAATTGTGGTAACCCTGGCTCTGATCCTGGTCATGAGGCTAACTCTCTTGAAGTGTTTAATCAGGGGTTGTGTCAATTTGATCCGAAGGGCCAAGAATCAGAGTGTAATTGGGATAATTTAATCTCTGGAGATACTGATTTCTTCGTTTTCAATTCCCCAAATGACGCAGCTTTTAAGGGTATAATGCAGAAACCAGATTCTCATTTTATGTCTCTGGTACTGGAATCTTCCATATATAATGGTCTGAGAGATAGCAAACTTAAAATAGAAGATTATCGTCCTGAGCCCTTAGCAATCATAGACCAAATGCAGGACAAACATTGCCTTGCCATGACTAGCAAAACAAAAGAAAAACCAAATGTTGAGGTTGTTTCTGTAATGAACTGTGGTACACGGAGGCGATGTCTAGACTTTGAGACTGACAGTGTGCAAAGGAAGAACTCAGATGATAATTTAAAATCCGGTTCTCTTGGATATGAAAAACAACTGGTTTCTGCAAAACGCAAAAGCAGTTCACAGCAATGCATTATGCCTGCAGTTGGCTTACATTTGAATGCACCCGACAAAGAAGTCATAAGTAATGATGAGTCGTCTTGCGGAATTCATCTTAATCTTCCCAGTTGCACTTCCGTGCAAATCTATACCAGCTATGAACATCAGGAACCACTAGCAATAGAAGTGGATTCATCAAACATTGGGCCTCAGCCAGCTAAGGATAATTCTCATGCATTAGATTCCACTGTTAATGATGTCAGTCAGAATAGTCCCAAAAAGAAAAGACATGGAGACTGCAAGCGTTGCAAGTGCAAGAAATCAAAGTGTTTGAAGTTATATTGTGAGTGCTTTGCTGCTCGTGACTACTGCACAGGCAACTGCTCATGTAAGGATTGCTGCAACAAACTTGTTCATAAAGACAAAGTCATTCAAGCTCACAAGCAGATCGAGTCTCGCAATCCTCTGGCTTTTGCTCCTAAAGTCATTCCTGAACCTGAAATTGGGAATGATCCAAATAAAACTCCAGCACCAGCACGACACAAGAGGGGATGCAACTGCAAACAATCAGTCTGCATAAAGAAATACTGTGAATGCTTTCAGGCTGGTGTTGGATGCTCTTTAAGCTGTAGATGTGAAGGGTGTAAGAACACATTTGGTAGAAAGGAGGGTGAGTTGTCCCTTCTTTTGCAAATTAAATACCCATCAGAATCTAACTATTTTATTGTTTCAGGCGCTAATTCTATGGGAGTAGAAGCCCAGCTAGAAGTAGAAACAGAGGCCTGTGGAAAAGTTGTTGAAAAAGCATCACAGATAATTGAAGTTCAGAACTCCGATAATCATCCAGATTTTATTCCAATCTCTACGCCATTCCCTCTGTTTAGTTCATTGTCAGAGGTGAAACCAAACACTCGTTGGTCTCAGCCACCTAAGCATTCTCAAGCTGTTTCGGACCAGGAAATGACAGATGTTCTTGGAGGCCGAGGCAGAAGTGATAGGTCTCCCATGACCATCAAAACTTCTTCTCCAAGTGGGAAGAGGATTTCCACTTCTAAGGGTGAATTGACAATTTCTTTTCCTTCTCCTAATCATCATCGTTAG 2073 0.4182 MGATVVIPPATSVHELLECPVCTNSMYPPIHQDSPVFSFINSLSPIKPVKSAQIGQTFSSLSFPSPPRAFTSSNLTCFKESKVLRRHNPFGASRPGLSSEDGNKFQTSEEAIADSFHPYHNSRESQGNFHDGISVVDDSIALPGEHTDFSAEILQALNYNNCGNPGSDPGHEANSLEVFNQGLCQFDPKGQESECNWDNLISGDTDFFVFNSPNDAAFKGIMQKPDSHFMSLVLESSIYNGLRDSKLKIEDYRPEPLAIIDQMQDKHCLAMTSKTKEKPNVEVVSVMNCGTRRRCLDFETDSVQRKNSDDNLKSGSLGYEKQLVSAKRKSSSQQCIMPAVGLHLNAPDKEVISNDESSCGIHLNLPSCTSVQIYTSYEHQEPLAIEVDSSNIGPQPAKDNSHALDSTVNDVSQNSPKKKRHGDCKRCKCKKSKCLKLYCECFAARDYCTGNCSCKDCCNKLVHKDKVIQAHKQIESRNPLAFAPKVIPEPEIGNDPNKTPAPARHKRGCNCKQSVCIKKYCECFQAGVGCSLSCRCEGCKNTFGRKEGELSLLLQIKYPSESNYFIVSGANSMGVEAQLEVETEACGKVVEKASQIIEVQNSDNHPDFIPISTPFPLFSSLSEVKPNTRWSQPPKHSQAVSDQEMTDVLGGRGRSDRSPMTIKTSSPSGKRISTSKGELTISFPSPNHHR* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1059 690 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 507 542 IPR005172 -
Ahy11g1059 690 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 425 460 IPR005172 -
Ahy11g1059 690 ProSiteProfiles CRC domain profile. 423 544 IPR005172 -
Ahy11g1059 690 MobiDBLite consensus disorder prediction 626 644 - -
Ahy11g1059 690 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 27 676 - -
Ahy11g1059 690 MobiDBLite consensus disorder prediction 393 413 - -
Ahy11g1059 690 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 27 676 IPR044522 GO:0003700
Ahy11g1059 690 MobiDBLite consensus disorder prediction 626 690 - -
Ahy11g1059 690 SMART CXC_2 504 545 IPR033467 -
Ahy11g1059 690 SMART CXC_2 422 463 IPR033467 -
Ahy11g1059 690 MobiDBLite consensus disorder prediction 391 419 - -
Ahy11g1059 690 MobiDBLite consensus disorder prediction 658 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1059 Ahy-Chr11 27712263 27719738 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1059 32 548 CPP Transcription Factor Family AT4G14770 37.963 1.60e-91 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Ahy11g1059 TCR 1.50E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1059 - - aip:107628213 1342.41