Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1054 ATGGCTGTGAATGAATTAGACACGGAACAAGACCTTGCACCATCAAAGAAGAAGCCACTTTCTGAGGATGAGAAGAGGAAGAAGAAAATTGTGCCTGGGAGTTTGATGAAAGCGGTTGTGAGGCCTGGTGGTGGTGATTCTGGACCTTCAGATGGTGATCAGGTTATTTATCATTCCACAGTTCGAACATTAGACGGAGTGCTTGTGGAATCTACTAGGTCTGATTATGGAGGCAAGGGCACACCAATAAGACATGTTTTAGGCAAAAGCAAGATATTATTGGGCTTGCTGGAAGGAATCCCAACAATGTTGAAGGGTGAAGTGGCAATGTTCAAGATGAAGCCTCAGATGCACTATGGTGAGGATGATTGTCCTATTTCTGCTCCTGATAGTTTTCCAAAGGAGGATGAACTTCACTTTGAAATTGAGCTGATAGAATTTTTCAAAGCCAAGGTTGTTACTGATGATTTGGGAGTTGTGAAAAAGGTTATTAATGAAGGTCAGGGTTGGGAATCTCCAAGAGAACCTTACGAAGTGAAGGCTTGGATTTCAGCAAAGACAGCTACAGGGAAATTGATTATGTCACATACAAAAGGAGAACCATACTTCTTTACATTTGGAAAATCAGAGGTACCTAAAGGTCTTGAAATGGGAATAGGAACAATGACTCGGGAAGAGAAGGCTGTTATATATGTTACAAGTCAGTATTTAACTCAGTCTCCACTGATGCCTGTAATAGAGGATTACGATGAAGTGCAGTTTGAGGTGGAGCTCGTCCACTTTATTCAAGTGAGGGACATGCTTGGAGATGGGCGCCTAATAAAGCGCCGCATTCGTGATGGCAAAGGTGACTTCCCAATGGATTGCCCTCTTCATGACAGCCTACTTCGTGTACATTACAAGGGCACGATTGTCAATGAAGAAAATAGAGTATTCTACGATACAAGAGTTGATAATGATGGTGAGCCTTTGGAGTTCTGCTCTGGAGAAGGTCTGGTGCCAGAAGGATTTGAAATGAGTGTTCGTCTGATGCTTCCTGGAGAGATAGCTCTTGTCTCATGCCCCCCTGACTATGCATATGATAAGTTTCCAAGGCCAGCAAATGTCCCTGAGGGTGCTCATATTCAATGGGAGATTGAACTTCTTGGTTTTGAAATGCCAAAGGACTGGACTGGATTGGACTTTAATAGTATAATGAATGAGGCTGAGAAGATCAGAAACACGGGTAACAGGCTATTCAAAGAAGGAAAATATGAACTTGCAAAGGCAAAGTATGAAAAGGTGCTACGAGAGTTTAATCATGTTAATCCACAAGATGATGAAGAAGGAAAAATATTTGCAGATACACGGAATTTGTTACACCTTAATGTTGCTGCGTGCTATCTGAAAGTAGGAGAATGCAGAAAGTCCATTGAGACTTGCAACAAGGTTTTGGAAGCAAAGCCTGCACATGTCAAGGGTTTATATCGTCGTGGAATGGCCTACATGGCTAATGGAGATTTTGAAGAAGCAAGGAATGATTTCAAAATGATGATGAAAGTTGACAAGTCAGCTGAACCTGATGCAACTGCAGCTCTTTCGAAATTGAAGCAGAAGGAACAGGAAGTTGAGAGGAAAGCTCGGAAACAATTTAAAGGGCTTTTCGACAAGAAGCCTGGAGAGATTTCAGAAGTCAAAGCTGATGAAGATGGAAATCCAAGTACAAGTGAAAACCAGGACAGTGAAGAACACAGTGACGCCGATGGAACAAATTCAGAGGATTCTCATGAAGCTGCACCTGACGCACGTCCAAGGAGTTGGATCTCTCTCTTTTGGCCTACTGGCAAAAGAATTTTTGAGTCTCTTGGTCTGCAAAGATGTACCATACTGTGA 1872 0.4236 MAVNELDTEQDLAPSKKKPLSEDEKRKKKIVPGSLMKAVVRPGGGDSGPSDGDQVIYHSTVRTLDGVLVESTRSDYGGKGTPIRHVLGKSKILLGLLEGIPTMLKGEVAMFKMKPQMHYGEDDCPISAPDSFPKEDELHFEIELIEFFKAKVVTDDLGVVKKVINEGQGWESPREPYEVKAWISAKTATGKLIMSHTKGEPYFFTFGKSEVPKGLEMGIGTMTREEKAVIYVTSQYLTQSPLMPVIEDYDEVQFEVELVHFIQVRDMLGDGRLIKRRIRDGKGDFPMDCPLHDSLLRVHYKGTIVNEENRVFYDTRVDNDGEPLEFCSGEGLVPEGFEMSVRLMLPGEIALVSCPPDYAYDKFPRPANVPEGAHIQWEIELLGFEMPKDWTGLDFNSIMNEAEKIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDEEGKIFADTRNLLHLNVAACYLKVGECRKSIETCNKVLEAKPAHVKGLYRRGMAYMANGDFEEARNDFKMMMKVDKSAEPDATAALSKLKQKEQEVERKARKQFKGLFDKKPGEISEVKADEDGNPSTSENQDSEEHSDADGTNSEDSHEAAPDARPRSWISLFWPTGKRIFESLGLQRCTIL* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1054 623 Pfam Tetratricopeptide repeat 486 509 IPR019734 GO:0005515
Ahy11g1054 623 Gene3D - 3 150 IPR046357 GO:0003755
Ahy11g1054 623 ProSiteProfiles TPR repeat profile. 485 518 IPR019734 GO:0005515
Ahy11g1054 623 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 69 571 IPR031135 GO:0030154|GO:0042761|GO:0099402
Ahy11g1054 623 Gene3D - 151 263 IPR046357 GO:0003755
Ahy11g1054 623 MobiDBLite consensus disorder prediction 1 33 - -
Ahy11g1054 623 Gene3D - 264 384 IPR046357 GO:0003755
Ahy11g1054 623 MobiDBLite consensus disorder prediction 553 599 - -
Ahy11g1054 623 Gene3D Tetratricopeptide repeat domain 396 550 IPR011990 GO:0005515
Ahy11g1054 623 MobiDBLite consensus disorder prediction 553 594 - -
Ahy11g1054 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 173 259 IPR001179 GO:0003755
Ahy11g1054 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 294 382 IPR001179 GO:0003755
Ahy11g1054 623 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 49 145 IPR001179 GO:0003755
Ahy11g1054 623 SUPERFAMILY FKBP-like 267 384 - -
Ahy11g1054 623 MobiDBLite consensus disorder prediction 10 31 - -
Ahy11g1054 623 Coils Coil 522 542 - -
Ahy11g1054 623 SMART tpr_5 451 484 IPR019734 GO:0005515
Ahy11g1054 623 SMART tpr_5 485 518 IPR019734 GO:0005515
Ahy11g1054 623 SMART tpr_5 402 435 IPR019734 GO:0005515
Ahy11g1054 623 SUPERFAMILY TPR-like 400 540 IPR011990 GO:0005515
Ahy11g1054 623 SUPERFAMILY FKBP-like 151 261 - -
Ahy11g1054 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 195 262 IPR001179 GO:0003755
Ahy11g1054 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 148 IPR001179 GO:0003755
Ahy11g1054 623 SUPERFAMILY FKBP-like 25 151 - -
Ahy11g1054 623 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 293 385 IPR001179 GO:0003755
Ahy11g1054 623 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 69 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1054 Ahy-Chr11 27468815 27479021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1054 35 550 Calmodulin-binding Proteins AT5G48570 30.228 5.14e-64 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1054 - - gmx:100818201 1105.51