Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1039 ATGTCGATGGCTGGTTTGGATTTAGGAACAGCATCACGCTTCGTTCAAAATCTTCACAGACCAGACTTACACCTTCAGCAACAACACCATTACCAAGATTCCCAAGAACAACAACAACACACACCAGATCGTGCACCTGCACCTCAGTTCTCCGGCGAAGAAGATGATACCAGCCAAGGTGGCGGAAGCGGAAGCGGCGGTGGAGGCGGTTTCGAGCTCGGCTCCAGCTCTGGAGGCCGGCGCCCCCGGGGCCGTCCCCCAGGCTCGAAGAACAAGCCGAAACCGCCAGTCATCATCACAAGAGAGAGTGCCAACACGCTAAGAGCTCACATCCTCGAAGTTGCGAGCGGCTCCGACGTCTTCGACAGCGTCGCTACCTACGCACGGCGGCGCCAGCGCGGGATCTGCATCTTGAGCGGCAGCGGAACCGTCACCAATGTTACTATCCGGCAGCCAGCTGCGGCAGGCTCCGTTGTCACGCTCCAGGGAAGGTTCGAGATCCTGTCGCTCTCCGGCTCCTTCCTCCCGCCGCCTGCTCCGCCCGGTGCCACCAGCCTCAGCATCTACCTCGCTGGCGGCCAGGGACAGGTAGTCGGAGGAAACGTCGTCGGAGAGCTGATCGCTGCGGGGCCAGTGATCGTCATCGCCTCGTCGTTCACGAACGTGGCGTACGAGCGGCTGCCGTTGGACGAGGAGGAGCAGCTCCAGATTCAGCCGCCCGGAAGTGCGGCGGCTGGAAGTCAGGGCTCCGCCGGCGTCGGAAACAACGCTTTTCCAGATCCTTCTTCGGGTTTGCCGTTCTTCAATTTGCCGCTTGGTATGCAGAATAATAATGTTCAATTGCCTGTTGACGGTTACTCTTCAGGTCCACGCCCTCCGTTTTAA 885 0.5966 MSMAGLDLGTASRFVQNLHRPDLHLQQQHHYQDSQEQQQHTPDRAPAPQFSGEEDDTSQGGGSGSGGGGGFELGSSSGGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVASGSDVFDSVATYARRRQRGICILSGSGTVTNVTIRQPAAAGSVVTLQGRFEILSLSGSFLPPPAPPGATSLSIYLAGGQGQVVGGNVVGELIAAGPVIVIASSFTNVAYERLPLDEEEQLQIQPPGSAAAGSQGSAGVGNNAFPDPSSGLPFFNLPLGMQNNNVQLPVDGYSSGPRPPF* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1039 294 MobiDBLite consensus disorder prediction 237 258 - -
Ahy11g1039 294 ProSiteProfiles PPC domain profile profile. 104 241 IPR005175 -
Ahy11g1039 294 MobiDBLite consensus disorder prediction 30 45 - -
Ahy11g1039 294 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 239 - -
Ahy11g1039 294 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 3 292 - -
Ahy11g1039 294 MobiDBLite consensus disorder prediction 26 97 - -
Ahy11g1039 294 Gene3D - 107 240 - -
Ahy11g1039 294 MobiDBLite consensus disorder prediction 240 257 - -
Ahy11g1039 294 CDD DUF296 108 191 IPR005175 -
Ahy11g1039 294 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 221 IPR005175 -
Ahy11g1039 294 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 292 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1039 Ahy-Chr11 24718425 24720209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1039 3 294 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 62.662 1.09e-91 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1039 - - pvu:PHAVU_003G230600g 356.681