Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1022 ATGCCTCCAACTCCACAAGAACACGAGCAACCGCTCTTACTGGACTCACCGCAACAAGCCGATGAGTTCGAGGAAACAGCCTACGATTCTTCCGAGAAGATCGTGGTAGTTGGAATCGACGAGTCAGAGTACGAGTCCGGGAACTGGGCCCGGGCCCCGCCGTTCTCATGGAGGAAGCTATGGCTATTCACGGGCCCGGGCTTTCTCATGAGCATAGCGTTCTTGGACCCAGGGAACCTGGAAGGAGACCTGCAGGCCGGTGCCATTGCGGGGTACTCGCTGCTGTGGCTGCTCATGTGGGCCACAGCCATGGGCCTGCTGATCCAGCTGCTGTCGGCCCGGCTCGGCGTGGCAACGGGCAGGCACCTCGCGGAGCTTTGTCGGGAGGAGTACCCGACGTGGGCTCGGAACGTGCTGTGGGTTATGGCTGAGGTGGCACTTATTGGTTCTGATATTCAGGAGGTTATTGGTAGTGCTATTGCTATAAGGATCCTTAGTAATGGCTTTGTGCCTCTTTGGGCTGGAGTCACCATAACTGCTCTTGATTGTTTTGTTTTTCTTCTTCTGGAGAATTATGGTGTGCGGAAACTGGAAGCTGTTTTTGCTGTTCTCATTGCGATAATGGCGGTTGCCTTTGCATGGATGTTTGGTGAAACAAAGCCCAGTGGCAAGGAGTTGCTTCTTGGTATTTTGATTCCGAAGCTTAGCTCTAGAACTATACAGCAGGCTGTTGGAGTTGTGGGCTGCATTATTATGCCTCATAATGTGTTCTTGCACTCTGCGCTTGTTCAATCAAGGAGGGTTGATCACCGGAATAAAGGCCGAGTTCAAGAAGCTCTTAATTATTACTCAATAGAGTCCACCATGGCCCTTATAGTCTCCTTTGTTATTAATATATTTGTCACAACCGTTTTTGCTAAGGGGTTTTATGGTACGGAACTAGCAAACAACATTGGTCTTGTAAATGCAGGACAGTATCTTCAGGAGAAGTATGGGGGTGGACTATTTCCAATACTGTATATATGGGGTATTGGGTTATTAGCAGCAGGACAAAGTAGCACTCTTACGGGTACCTATGCAGGTCAATTTATCATGGGGGGTTTCCTAAATTTAAGGTTGAAAAAATGGATGAGAGCACTAATTACACGAAGCTTTGCAATTATTCCAACTATGATAGTTGCTCTTATTTTCGACACCTCTGAGCAATCGTTAGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTTCAAATCCCCTTTGCACTTATTCCCTTGCTTTGTTTGGTGTCAAAGGAGCAGATAATGGGAAGTTTCAGAATTGGCCCCGTCCTCAAGATTATTTCATGGCTCGTGACTGCTCTGGTGATAGTGATCAATGGCTACCTTCTGCTGGAATTCTTCTCGCACGAAGTGAATGGCGCAATAGTCGGCACTGTAGTGTGCGTGCTAACAACTGCATATGTTGCATTCATAGTATACCTTATTTCACGGGCCGTTACGTATTCGCCTTGGCAAAGTGTGACACAGCGAAAGTCAATTACTAACTCAGAGTTAGAGTAA 1563 0.4747 MPPTPQEHEQPLLLDSPQQADEFEETAYDSSEKIVVVGIDESEYESGNWARAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCREEYPTWARNVLWVMAEVALIGSDIQEVIGSAIAIRILSNGFVPLWAGVTITALDCFVFLLLENYGVRKLEAVFAVLIAIMAVAFAWMFGETKPSGKELLLGILIPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRRVDHRNKGRVQEALNYYSIESTMALIVSFVINIFVTTVFAKGFYGTELANNIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALIFDTSEQSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPVLKIISWLVTALVIVINGYLLLEFFSHEVNGAIVGTVVCVLTTAYVAFIVYLISRAVTYSPWQSVTQRKSITNSELE* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1022 520 Hamap Divalent metal cation transporter MntH [mntH]. 46 468 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy11g1022 520 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 19 517 - -
Ahy11g1022 520 PRINTS Natural resistance-associated macrophage protein signature 169 188 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy11g1022 520 PRINTS Natural resistance-associated macrophage protein signature 350 369 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy11g1022 520 PRINTS Natural resistance-associated macrophage protein signature 139 165 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy11g1022 520 PRINTS Natural resistance-associated macrophage protein signature 194 215 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy11g1022 520 PRINTS Natural resistance-associated macrophage protein signature 412 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy11g1022 520 PRINTS Natural resistance-associated macrophage protein signature 243 266 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy11g1022 520 PRINTS Natural resistance-associated macrophage protein signature 378 395 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy11g1022 520 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 58 436 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy11g1022 520 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 19 517 IPR001046 GO:0016020|GO:0030001|GO:0046873
Ahy11g1022 520 Pfam Natural resistance-associated macrophage protein 81 442 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1022 Ahy-Chr11 23323166 23326306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy11g1022 5 505 Inorganic Solute Cotransporters AT2G23150 77.336 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1022 K21398 - gmx:100807811 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1022 11 23323166 23326306 Ahy11g1022 11 23323166 23326306 ECH
Ahy11g1022 11 23323166 23326306 Ahy1g1016 1 18463160 18467062 hybridization
Ahy5g0591 5 7478196 7481373 Ahy11g1022 11 23323166 23326306 PCT
Ahy11g1022 11 23323166 23326306 Ahy5g0591 5 7478196 7481373 PCT